LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g02568	ATGGCAACGATCTCTCAAACTCCAAATATCAGAACCATCCAAGAACAAATTGCTGATAAGTTGGGTTTTAAATTAAAGGAAAAATCAGAGGAAGGTAGAGCACAAAGACTATCACAAATATTAAGGGAAGGCACAACTCTTCTAATCTTGGATGATGTAAGGGAAAAGGTAAACTTTGAAGCTATAGGTATTCCATTCAATGAAAACAACAAGGGTTGTAGAGTACTCCTAACAACTCGAAATAGAAAAGTATGCACTGCTATGCAATATCAAATTATAATTGAGCTCAATCTCTTAACTTACGAGGAAGCTTGGGTTTTGTTCACATTGTATGCAAACATAACTGATGATGACACACCAAACTCTTTGAAAGTTGTGGCAAGAAAAATTGTTGATGAATGTAAAGGATTGCCTATTGCAATTGTGACGGTGGGAAGCACACTAAAGGGGAAAACTTTAGGAGACTGGAAGTCAGCATTGCCAAGACTACGAGATTCCAAACCACTGGTCATTCCAAAAGAGGACCATCAAATTTATTTGGAAGATTTATTTCGATTTGGAAAGGGATTGAGCCTCACTGGGACATTTGGAACAATGGAGAAAGCAAGGAAGGAGATGCATGTAGCTGTTAACATCCTCAGGGATTCTTGTTTGTTAATGCATGACAGTAACAAAGAAAGGGTGAAGATGCATGACATGGTTCATGATGTAGCCTTGTGGATAGCATTTGAAAGGGGTCAAGCAATTTTGGCAAGTATAGGAATGGATCCAAGAATGTTGGTAGAGGATGAAACCATAGAAGATAAGAAAGCAATATCCTTATGGGATTTGAAAGATTGTCAGCTTCCTGATGATCAATTGAATTGTCCAACACTTAAAATTCTCTTGCTTCATTCTCCAGAGGTTGGCTTTGAAGTACCAAATGTGTATCTAGAAAGGTTGGAAATGCTTAAAGTCCTGGCATTCTTAAGATATGGCTATGAGTGA	987	0.3789	MATISQTPNIRTIQEQIADKLGFKLKEKSEEGRAQRLSQILREGTTLLILDDVREKVNFEAIGIPFNENNKGCRVLLTTRNRKVCTAMQYQIIIELNLLTYEEAWVLFTLYANITDDDTPNSLKVVARKIVDECKGLPIAIVTVGSTLKGKTLGDWKSALPRLRDSKPLVIPKEDHQIYLEDLFRFGKGLSLTGTFGTMEKARKEMHVAVNILRDSCLLMHDSNKERVKMHDMVHDVALWIAFERGQAILASIGMDPRMLVEDETIEDKKAISLWDLKDCQLPDDQLNCPTLKILLLHSPEVGFEVPNVYLERLEMLKVLAFLRYGYE	328

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g02568	328	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	1	322	-	-
	Pumo9g02568	328	PRINTS	Disease resistance protein signature	134	148	-	-
	Pumo9g02568	328	PRINTS	Disease resistance protein signature	40	54	-	-
	Pumo9g02568	328	Pfam	NB-ARC domain	3	166	IPR002182	GO:0043531
	Pumo9g02568	328	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	165	IPR027417	-
	Pumo9g02568	328	Gene3D	-	1	95	IPR027417	-
	Pumo9g02568	328	Gene3D	-	99	181	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g02568	Pumo-Chr9	61176085	61177167	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g02568	41	276	WRKY Transcription Factor Family	AT5G45050	23.790	3.50e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g02568	-		-	gmx:102670229	456.062