Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02562 ATGGTGTTAGTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTAGCAACTAATCACACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGACGAGATCATTGTTTTGGAAAATGGGAAGGTGATTGAGCAAGGACCCCATGAAGTGCTCTTTTCAAAAGCAGGAAGATATGCACAGCTGTGGGGACAGCAAAATAACACTGTTAATGCAATTGATACAGCCATCAAGCTGGGAGCATAA 291 0.4261 MVLVLCDEATSALDSTTEAEILSALKSVATNHTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLFSKAGRYAQLWGQQNNTVNAIDTAIKLGA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02562 96 Gene3D - 1 93 IPR027417 -
Pumo9g02562 96 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 77 IPR039421 -
Pumo9g02562 96 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02562 Pumo-Chr9 60961132 60963228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02562 3 77 Calmodulin-binding Proteins AT2G36910 46.753 4.02e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02562 K05662 - ccaj:109817710 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02562 9 60961132 60963228 Pumo9g02562 9 60961132 60963228 ECH