Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02521 ATGGAGCAGGAACAACAAAACCTTGGAAGCTTCTTATCATGGGCAGCACAGATTGGAATAACAGACTCAACAAGCACCAACCAACCTCAACACTCTCTTTCTTCATGTTTGGGTTCTTCTCTCTGTGTCTCTCATTTTCCTCACTCTGGCGGGAGAGGTTTGGGTGCTGTGAGAGACCTTAGGAGGGGAGAGATTGTTCTCAGAGTTCCAAAATCTGCTTTAATGACAACAGAGAGTGTTAAGGAAGATAAAAAGCTCGGTGATGCTGTCAATAGACACTCTTCTCTCTCCTCAGCTCAGATGCTGATTGTTTGCTTGTTGTATGAAATGGGTAAAGGAAAGGCTTCAAGGTGGCATCCTTACCTCATGCATTTGCCGCACACTTATGACATACTAGCCATGTTTGGTGAATTTGAGAAGCGTGCTCTGCAAGTCGATGAGGCGATATGGGTCACTGAAAAAGCTACACTAAAAGCCAAATCAGAGTGGAAAGAAGCTCATGCTTTGATGGAAGATCTCATGTTTAAGCCCCAGTTTTTAACATTTAAAGCTTGGGTTTGGGCTGCTGCAACGATATCTTCCCGGACATTGCATATACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAGAGGAGCCATCTGGCATTGAGGATTTAGAGTATTTGCTATCTAACACTTCCATCCCTGATACTATCTTATTGAATGGAGACAAGAATATTATGGTAGATGCAGAACAGCTTGATTCTCATTCTCAGAGATTAACAGATGGTGGGTTTGAGGAAGATGTTAATGCATATTGCTTTTATGCTAGGTCACATTACAAGAAAGGAGATCAGGTTCTATTATGCTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGGTTTCTACTACAAGAAAATCCAAATGACAAAGTTTTTATCCCTTTGGAACCTGCTGTATATTCTTTCACTTCATGGTCTAAGGAATCACTCTATATCCATCACAATGGGAAGCCTTCCTTTGCACTACTAGCTGCATTGCGGTTGTGGGCAACCCCTCAAAACAAGAGGAGGTCTGTTGGACATCTTGTGTATTCTGGTTCTCAACTGTCTGCAGACAATGAAATTTTCATCATGAAATGGCTGTCAAAAACTTGTGATGCCATGTTAAAGAATCTGCCAACATCCCTTGAGGAAGACACCTTGCTCCTGAATGCAATGGACAATAGTCAAGATTTTTCTACTTTCATGGAGATCACAAAGTTAATGTCTTCCAGGGAAGAGATTTATACCTTCTTAGAAACGCATAATATGAAGGATGCTCATAGTTTTACTGACATAATTTTATCTAGAAAAGCAAGAAGATCCATGGACAGGTGGAAATTAGCTGTCCAATGGAGGCTCAAGTATAAGAAAGTCCTTTTTGATTGTATCTCTTATTGCAATGAAATACTGGATTCTTTCATGAAATAA 1491 0.4071 MEQEQQNLGSFLSWAAQIGITDSTSTNQPQHSLSSCLGSSLCVSHFPHSGGRGLGAVRDLRRGEIVLRVPKSALMTTESVKEDKKLGDAVNRHSSLSSAQMLIVCLLYEMGKGKASRWHPYLMHLPHTYDILAMFGEFEKRALQVDEAIWVTEKATLKAKSEWKEAHALMEDLMFKPQFLTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEPSGIEDLEYLLSNTSIPDTILLNGDKNIMVDAEQLDSHSQRLTDGGFEEDVNAYCFYARSHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKVFIPLEPAVYSFTSWSKESLYIHHNGKPSFALLAALRLWATPQNKRRSVGHLVYSGSQLSADNEIFIMKWLSKTCDAMLKNLPTSLEEDTLLLNAMDNSQDFSTFMEITKLMSSREEIYTFLETHNMKDAHSFTDIILSRKARRSMDRWKLAVQWRLKYKKVLFDCISYCNEILDSFMK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02521 496 Gene3D - 327 495 IPR036464 -
Pumo9g02521 496 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Pumo9g02521 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 8 430 - -
Pumo9g02521 496 FunFam Protein SET DOMAIN GROUP 40 313 428 - -
Pumo9g02521 496 SUPERFAMILY SET domain 8 313 IPR046341 -
Pumo9g02521 496 Pfam SET domain 51 295 IPR001214 GO:0005515
Pumo9g02521 496 CDD SET_LSMT 50 309 - -
Pumo9g02521 496 ProSiteProfiles SET domain profile. 39 295 IPR001214 GO:0005515
Pumo9g02521 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 305 486 IPR036464 -
Pumo9g02521 496 Pfam Rubisco LSMT substrate-binding 344 480 IPR015353 -
Pumo9g02521 496 FunFam Protein SET DOMAIN GROUP 40 8 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02521 51 337 NAC Transcription Factor Family AT3G56570 22.222 4.34e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo9g02521 SET 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02521 - - gmx:100787452 929.472