Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02519 ATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGTCTTGATGAAAGAGAATGCGAAACTGCTTCAGGCTTACAGGATGCATATGCTCTTTGCCGTGTGGTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGGGGGCACTATGTTAATGTTCCCAATGCCAACCAGATTATTACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGAGGCGAAGATTTAGATAGCTCAAATTATTTGATGCCGGTGGAAACTTGCTCACCCCACAACATGGGAAATGAGACTTCTCTCACTATCAATGGTGGGACTACAAGGGATCATGAGAAATGGTCACACTTCTCATCATCACAAGACCCATTATTTAGTTTTCCAAGTTCTTCATTTCCCAATTTTGGAGCCATAGCATACCCTCCATCCAAGGTGGATATAGCTCTAGAGTGTGCAAGGATGCAGCATAGGTTTGCTATGCCTCCTTTGGAGGTGGATGACTTCCCTCAAGTTGGAATCTCAGAGCTGAAAATGGCACAAGCCTCCGGTTCCATGCAAGGAGGCAGAACTGAAACGGATATCTTGCAGGAAATTCTTTCAGTTGCTCAAGCTTCTCAGGAATTAATAAATAATCAATCCAGCTACTCGCAGGAATGGGGTGGCATTAATGATAATTATGCTCCTCGTGAAGATGATTTTACCTTCACGGTTGGCACTGATTATAATTACAATCATTCAAATGAAATGAGCTCAATGAGGTATGATGACAAGACATGGGAAGATGCAAACACAAGGACAATAGAGATAGGAGATGTGGATGAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGAGAGGATATAGAAAAGATGGAAGAACAAAAGATTGTTCCAATAGAGGATATTTCAAGCTTCCAGACTAACAGGGAAGAAAATGAGGTGCAAGAATCTGAGCAACATATCAAAAAGGAACACAATGACACTGAAATCAACGATTTCTCATTGGGCTTCATCAATGACGATGACCCTAACGAGAACTTCATAGAAGATGGTAACAATATGGATGATTATTATTCAAGTTCTCCTAGCTTTGAGGTCGTTGAGGAAGTAAAGGTCAATCATGGAATGCTTGTTTCGACTCGTCAAGTGGTCGAGACATTCTTTCACCAAATAGTTCCTTCACAAACCGTCCAATTAGTTCACCTCAATTCAGTGATGGCACACAATCATTATGTAGAGAATAATGCAGAGGCAATGCTAATGATAATGGAGAACCAAGGGTCTTTATTAAGGAAGGTTAAGGCCTATGTGATGGAGAAGCTTATAAAGCCTTCGAAGACAATAGCAAGTGCAATTGTATTCCTCTTTGCACTTGTGTTGATGCATTGTGTTTATTTGAAGGAAGAAGTGGAAATTTGGAATGAGTCAAATGAGGTTTGGTTTGTTGGTGTCAAAAGTCATGAGAAAGGATTAAGTGCGGTCTTGAAGAAAATAGGCATTTTTCTCACCATATCTTTGGTTCTTTGTACCATGTGGGCTAACCAGAATGTGGTAGTTAACCCTTGA 1626 0.4059 MKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETASGLQDAYALCRVVKKTAVIPPKVGGHYVNVPNANQIITSDQSSSIELYSEGRGEDLDSSNYLMPVETCSPHNMGNETSLTINGGTTRDHEKWSHFSSSQDPLFSFPSSSFPNFGAIAYPPSKVDIALECARMQHRFAMPPLEVDDFPQVGISELKMAQASGSMQGGRTETDILQEILSVAQASQELINNQSSYSQEWGGINDNYAPREDDFTFTVGTDYNYNHSNEMSSMRYDDKTWEDANTRTIEIGDVDEEFKAERMVENLRWVGMSREDIEKMEEQKIVPIEDISSFQTNREENEVQESEQHIKKEHNDTEINDFSLGFINDDDPNENFIEDGNNMDDYYSSSPSFEVVEEVKVNHGMLVSTRQVVETFFHQIVPSQTVQLVHLNSVMAHNHYVENNAEAMLMIMENQGSLLRKVKAYVMEKLIKPSKTIASAIVFLFALVLMHCVYLKEEVEIWNESNEVWFVGVKSHEKGLSAVLKKIGIFLTISLVLCTMWANQNVVVNP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02519 541 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 192 - -
Pumo9g02519 541 Pfam No apical meristem (NAM) protein 1 27 IPR003441 GO:0003677|GO:0006355
Pumo9g02519 541 Coils Coil 327 347 - -
Pumo9g02519 541 Gene3D NAC domain 1 53 IPR036093 GO:0003677|GO:0006355
Pumo9g02519 541 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
Pumo9g02519 541 SUPERFAMILY NAC domain 1 50 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02519 Pumo-Chr9 59962766 59965894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02519 2 485 NAC Transcription Factor Family AT1G65910 37.090 3.61e-83 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02519 - - gmx:100809019 906.746