Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02517 ATGTCAAAGGGTGACAAGGTTGAACTTTTGGACTTTTGGGCTAGCCCATTTTGTGCAAGAGCGAAAATTGCTTTGGAAGAGAAAAGGGTGAACTATGTAGCCAGTGAAGAGGATTTGTTTGGAGGCAAGAGTGAGCTTCTCCTAAAGTCAAATCCCATTCATCAAAAAGTTCCTGTGCTCTTGCACAATGACAAACCTCTCGCTGAGTCTGCTATCATTGTTAGCTACATTGATGAAGCGTGGCCTTCCAACCCACTGCTTCCAACTCTTGCTTATGATCGTGCACAAGCCAGATTCTGGGTTGATTACATTGACAAAAAGAATTATGTGTGCATATATGATTATGGATGGTTACTTTTTATACTTGGAAGGTATTTGAAACCGGGAGGAGTATCTGGGCAAGCAATGGAGAAGAGAGAGAAGTGGGCACTAGGGACTTCAGTTGAAGTTTTAAAGCATCTTGAGGAAGCTCTTGGGGAGAAGGACTATTTTGGTGGTGATGCCTTTGGGTATGTGGACATCATAGCCATTCCTCATTCAGCTTGGTTTTTAGCTTATGAGAAGCTTGGGGGCTTCAAAATTGAAGACCATTCACCAAAATTCTCAGCTTGGATCAAGAGGTGTTTGAAAAGGGAATCTGTTGCCAAAGTTCTGCCAGACCCAGAAAAGGTCTACCAGTTTGTGCTTCATTTCAGGAAGATGTCAGGACTTGAATAG 717 0.4282 MSKGDKVELLDFWASPFCARAKIALEEKRVNYVASEEDLFGGKSELLLKSNPIHQKVPVLLHNDKPLAESAIIVSYIDEAWPSNPLLPTLAYDRAQARFWVDYIDKKNYVCIYDYGWLLFILGRYLKPGGVSGQAMEKREKWALGTSVEVLKHLEEALGEKDYFGGDAFGYVDIIAIPHSAWFLAYEKLGGFKIEDHSPKFSAWIKRCLKRESVAKVLPDPEKVYQFVLHFRKMSGLE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02517 238 SUPERFAMILY GST C-terminal domain-like 79 234 IPR036282 -
Pumo9g02517 238 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Pumo9g02517 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Pumo9g02517 238 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 226 IPR045073 -
Pumo9g02517 238 CDD GST_N_Tau 7 81 - -
Pumo9g02517 238 CDD GST_C_Tau 91 231 IPR045074 GO:0004364|GO:0006749
Pumo9g02517 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Pumo9g02517 238 Pfam Glutathione S-transferase, C-terminal domain 148 207 - -
Pumo9g02517 238 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Pumo9g02517 238 Gene3D Glutaredoxin 1 89 - -
Pumo9g02517 238 FunFam Tau class glutathione S-transferase 1 89 - -
Pumo9g02517 238 SFLD Main.3: Omega- and Tau-like 4 235 IPR045073 -
Pumo9g02517 238 Gene3D - 90 238 - -
Pumo9g02517 238 SFLD Glutathione Transferase (cytosolic) 4 235 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02517 Pumo-Chr9 59955959 59957187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02517 4 238 Glutathione S-transferase Gene Family AT1G17180 50.424 2.02e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02517 K00799 - gmx:100788517 371.318