Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02513 ATGGCGATACAAGGCCAAAATACATTTACTAGATCACTACATGATCAGTTTTCTTGTGGAAATGACTATGCCCTGAAGGTTAGGAAACCATATACTATCACCAAGCAGAGAGAGAGGTGGACGGATGAAGAACATAAGAAATTCCTTGAGGCCTTAAAGCTATATGGCAGGGCATGGCGACGGATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGATTCTTCGAGAGTCTGGTGGGAACAGCACAACCTTGGAGGAGTCAATTGAAATTCCACCTCCACGACCAAAACGGAAGCCAATTCATCCTTACCCTCGTAAACTAGTCGAGATTCCAAAGAAAGAAATTTCCAACTCAGAACACCCACTGAGGTCTAATTCTCTTAAGTCATCAGATTTTGGTCAAGAAAACAATTCTCCCAAGTCAGTGTTATCTACAGTTGTTTCAGAAACCCTTGGTTCCTCCGATTCAGATTCACCTACTAGAAGTTTGTCACCAGCCTCATCCATTAGTGGTGTCCCCACAAACAGATTTCCACTTGCTGAGCCCAAAACATCATTTGAGGAAGAAGGGTCTCCACCAAGTTCAGCTCATGATGAGCAACCTCCTGTGAAACTGGAGCTTTTTCACAAAGAAAGTGTTTCTACCAAAGATGATGCAGCAGAAGAATCATCTTGTCGTACTCTCAAACTTTTTGGGACAACTCTACTGGTAACAGATACATGCAAACCTTCTTCTCCAACAATGGAGCCATGCAAACCAATACCTACGGCTGCAATGTATCTTATGCAACTTCAAAATGGGTGTTCAGATATTACAGAAGGTCATGCAAGTATTGTTCCTAGGTGGACTCTTCCCCACAATGCACCATTCCTGCCACTGCACAAGGAGCCAAAAGGGAATAATTTATACTCCAACCTTGGAGAGTTTGAACATAAAGAAGATCAAAAGGAAGGATCATGGACTGGTTCAAATACTAGTTCAATTAATGATGGAGATAACACTGAAAAATCAGATGATCAAGCCAAAAGTCATGTGCAATGCTTTAGCAAAAGTGAAACCTCAACTACATCTGAGCTAAGGGTGAGACCTAACACCTGTCGAAAAGGGTTTGTACCATATAAAAGGTGCATGGCAGAGAGAGAAAACCAGTACTCACCAGTATGTGATGAGTAG 1209 0.4194 MAIQGQNTFTRSLHDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKILRESGGNSTTLEESIEIPPPRPKRKPIHPYPRKLVEIPKKEISNSEHPLRSNSLKSSDFGQENNSPKSVLSTVVSETLGSSDSDSPTRSLSPASSISGVPTNRFPLAEPKTSFEEEGSPPSSAHDEQPPVKLELFHKESVSTKDDAAEESSCRTLKLFGTTLLVTDTCKPSSPTMEPCKPIPTAAMYLMQLQNGCSDITEGHASIVPRWTLPHNAPFLPLHKEPKGNNLYSNLGEFEHKEDQKEGSWTGSNTSSINDGDNTEKSDDQAKSHVQCFSKSETSTTSELRVRPNTCRKGFVPYKRCMAERENQYSPVCDE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02513 402 MobiDBLite consensus disorder prediction 102 131 - -
Pumo9g02513 402 FunFam protein REVEILLE 6 isoform X1 39 87 - -
Pumo9g02513 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Pumo9g02513 402 PANTHER SWI/SNF COMPLEX-RELATED 21 343 - -
Pumo9g02513 402 Gene3D - 39 85 - -
Pumo9g02513 402 ProSiteProfiles Myb-like domain profile. 32 82 IPR001005 -
Pumo9g02513 402 MobiDBLite consensus disorder prediction 325 371 - -
Pumo9g02513 402 SUPERFAMILY Homeodomain-like 31 85 IPR009057 -
Pumo9g02513 402 CDD SANT 39 82 IPR001005 -
Pumo9g02513 402 MobiDBLite consensus disorder prediction 93 214 - -
Pumo9g02513 402 Pfam Myb-like DNA-binding domain 37 80 IPR001005 -
Pumo9g02513 402 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 84 IPR006447 GO:0003677
Pumo9g02513 402 MobiDBLite consensus disorder prediction 132 186 - -
Pumo9g02513 402 ProSiteProfiles SANT domain profile. 35 86 IPR017884 -
Pumo9g02513 402 SMART sant 36 84 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02513 Pumo-Chr9 59922962 59926625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo9g02513 Myb_DNA-binding 9.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02513 - - gmx:778060 696.427