Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02506 ATGTTGGATGAAGGGTTCAATGCCAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACTGAGCATGATAAGTCGCCGGATGCCACGGTGGCTGCAGGGACAATGGGGTACTTGGCACCTGAGTATCTCCTTACGGGGAAGGCTACAGAGAAAACTGATGTGTTTAGTTATGGTGCAGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCAATAGAGAAGGATGCCAATGGGGGTGGTAAAGGTGGGATTAGCTGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGGGAAGGGAGGTTGCTAATGGTGGCTGATCCGAGGCTTGAGGGCGAGTTCGATGAGGGGGAGATGAGGAGGGTGCTCTTGGTTGGGCTAGCTTGCTCTCACCCTGATCCATTGGCTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGTGAGGCTGAAGTGCCTATTGTCCCAAGAACCAAGCCGACGACTGGTTTTAGTACTTCCCACTCCCACTTATTACTGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACCTCCACATCAGATAACAGCTTCAATCTTGGAGATCTAGTCTGA 606 0.505 MLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGGGKGGISCNLVEWVWSLHREGRLLMVADPRLEGEFDEGEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPTTGFSTSHSHLLLSLQDSVSDCDGIITISTSTSDNSFNLGDLV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02506 201 Pfam Protein kinase domain 2 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02506 201 SUPERFAMILY Protein kinase-like (PK-like) 1 169 IPR011009 -
Pumo9g02506 201 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
Pumo9g02506 201 FunFam Lectin-domain containing receptor kinase A4.3 1 164 - -
Pumo9g02506 201 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02506 201 PANTHER - 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02506 Pumo-Chr9 59771937 59772542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02506 1 183 Receptor kinase-like Gene Family AT3G53380 74.457 1.39e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g02506 Pkinase 6.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02506 - - gmx:100810624 374.015