Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02505 ATGGACGTGGAGTTTAAGGACATTAATGGAAACCACGTTGGTGTGGACTTAAACAGCGTCGTTTCGAGCGAGGTTGGTGATTTGGGGATCGTTGGGATCGATCTGAAGAGTGGCGACCTAATCAACGCGTGGATCGAGTTCGATGGATCGAGCAAAGGGTTAAGCGTGTGGGTTTCGTATTCCAATCTCAAGCCGAAAGATCCCGTTTTGACGATGAATCTCGACGTGGATAAGTATTTGAATGATTTTATGTATGTGGGGTTCTCTGCTTCAACGCAGGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGCTTTGGGTCGTCTTTTGCGGCGGCGGAGGCGGCGGCGCCGCCTCCTCCGCCGGCGGTGAGTTTGATGAACCCGACGGCGAACTCGGTGAAATCCGTGCCACCTTCTTTGGCTCCTTCTCATAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGTCATAATGGGTTGTGTAAGCAAAAGTTGGGGGCCGTTGCTGGTGTTGTTACTGCTGGGGCATTTGTTTTGGCTCTTTTTTCTGGTGCTTTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGGTCGGAGATCATTAAAATGCCGAAGCAGTTTAGCTACAAGGAGCTGAAGTCTGCTACCAAGTGCTTCAATGAGAATAGGATCATTGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAGAATGGGGACATTGTTGCAGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAATGAGTTTTTGTCTGAGTTGTCAATCATTGGGAGCCTGAGGCATCGGAACCTTGTTCGGCTTCAAGGGTGGTGCCATGAGAAAGGGGAGATTTTGCTGGTGTATGACTTGATGCCTAATGGGAGTTTGGATAAGGCATTGTTTGAGGCTAGGACGCCGCTTCCCTGGTCTCATAGACGCAAGATTTTGTTGGGTGTAGGCTTCGGCATTGGCCTACTTGCATCAAGAGTGTGA 1029 0.4879 MDVEFKDINGNHVGVDLNSVVSSEVGDLGIVGIDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLTMNLDVDKYLNDFMYVGFSASTQGSTEIHRIEWWSFGSSFAAAEAAAPPPPPAVSLMNPTANSVKSVPPSLAPSHSEEKESKSKSSCHNGLCKQKLGAVAGVVTAGAFVLALFSGALIWFYSKKVKRVNKFDSLGSEIIKMPKQFSYKELKSATKCFNENRIIGHGAFGTVYKGVLPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVGFGIGLLASRV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02505 342 Pfam Legume lectin domain 4 116 IPR001220 GO:0030246
Pumo9g02505 342 ProSitePatterns Protein kinases ATP-binding region signature. 233 256 IPR017441 GO:0005524
Pumo9g02505 342 Pfam Protein kinase domain 227 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02505 342 CDD lectin_legume_LecRK_Arcelin_ConA 1 110 IPR001220 GO:0030246
Pumo9g02505 342 SMART tyrkin_6 227 342 IPR020635 GO:0004713|GO:0006468
Pumo9g02505 342 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 249 IPR013320 -
Pumo9g02505 342 ProSiteProfiles Protein kinase domain profile. 227 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02505 342 FunFam L-type lectin-domain containing receptor kinase VIII.1 191 302 - -
Pumo9g02505 342 PANTHER - 4 335 - -
Pumo9g02505 342 MobiDBLite consensus disorder prediction 121 156 - -
Pumo9g02505 342 SUPERFAMILY Protein kinase-like (PK-like) 213 340 IPR011009 -
Pumo9g02505 342 Gene3D Phosphorylase Kinase; domain 1 190 302 - -
Pumo9g02505 342 Gene3D - 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02505 Pumo-Chr9 59770868 59771896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02505 1 338 Receptor kinase-like Gene Family AT3G53380 68.678 5.21e-160 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g02505 Pkinase 4.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02505 - - gmx:100793157 602.823