Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02498 ATGACCTTGGAGGGGATTTTCTTTGAGCCCACCTCAACCACTGCTCCTGATCTTTCCCTTCACATAAGCCCCCCAAGCATCTCCTCTTCCTTGATTTCCAATTATGAACTCCAAGGAGGTTTCCCAGCTTCAAGGACTACAGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGGAATAATTTCACTTCTGGAGGACAAACACCAACACCAACACCAACAACACACAACCCTTATTTTCAAAGCCAAACCCATTTCCATCATCTTCACCACCACCACAACAACACCAGTACTAGTCCTACTACAACAAGTGTTGTTACAAGGCTTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTCGTGGCCATGGACCATGCTAGAGACAACAACAACAACAACAACAACAAGGATCATCATCACCATCACAAGATGTGCTTCTATAATAATCATCACATGCCTTCTTATCCCTCTCTCTCTTCTTCCTCCACAGCTACTCCTTCTCCTTCACCCTCACCTTACTTTGTGGATCCCATGTCCCTCTTGAGCAACGGCTCCACCGTGGCGTGTAGGGCAGCCTCTGCTGCCACAAGGTTTAATGGGTTTTCTGCCGATGCTTTCAAATCTCATCCATTGCACCAATATGGGGTTGGCCCTTCAGAAGCCTCTTCTGGGTTCATGAGATCAAGGTTTTTGCAGAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCTCGATTTGTTCATGCCGTTGAACTTCTGGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACACTAGCTCATGTCAAGAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCATCTTCAGGCCATTCAGACGGGTCTGGAGAGGATGACTTGTCTCCGATGGGTAGCACCGCGGATCGCGGCGGTCTCCGGCAATTCCCCAACCACAGAGGGCGGCCGGAATGGGCGGCCGCGCAACAAGACATGGACTACTCTTCCACCACCACTCTATGGAGTAATTCTTCAAGTTGTGGAGAGTCACGGCTAAGACCTAGTTCTAACGACATAGATGGTGTCAGATCACCAATCCTCCATTCACAAACAATATCAGGAGGGCATCAAGTTCAGGAGTGTGATTCAACCCAACTCAAGAACACGCCAGGTTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAATTCACATTAGGAAGACCAGATTGGGAGGGCAAAGAACAACCCTAA 1317 0.4852 MTLEGIFFEPTSTTAPDLSLHISPPSISSSLISNYELQGGFPASRTTVSQAHTELSLGRNNFTSGGQTPTPTPTTHNPYFQSQTHFHHLHHHHNNTSTSPTTTSVVTRLEANQGDSGVSQPFIPFVAMDHARDNNNNNNNKDHHHHHKMCFYNNHHMPSYPSLSSSSTATPSPSPSPYFVDPMSLLSNGSTVACRAASAATRFNGFSADAFKSHPLHQYGVGPSEASSGFMRSRFLQKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPMGSTADRGGLRQFPNHRGRPEWAAAQQDMDYSSTTTLWSNSSSCGESRLRPSSNDIDGVRSPILHSQTISGGHQVQECDSTQLKNTPGSNLECKNPSLEFTLGRPDWEGKEQP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02498 438 MobiDBLite consensus disorder prediction 304 385 - -
Pumo9g02498 438 MobiDBLite consensus disorder prediction 405 421 - -
Pumo9g02498 438 MobiDBLite consensus disorder prediction 58 80 - -
Pumo9g02498 438 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 436 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pumo9g02498 438 MobiDBLite consensus disorder prediction 352 375 - -
Pumo9g02498 438 Gene3D - 247 304 - -
Pumo9g02498 438 FunFam Myb family transcription factor 246 304 - -
Pumo9g02498 438 MobiDBLite consensus disorder prediction 405 438 - -
Pumo9g02498 438 SUPERFAMILY Homeodomain-like 245 301 IPR009057 -
Pumo9g02498 438 NCBIfam myb-like DNA-binding domain, SHAQKYF class 248 301 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02498 Pumo-Chr9 59654446 59660674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02498 242 385 G2-like Transcription Factor Family AT4G17695 53.793 2.28e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo9g02498 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02498 - - gmx:100812229 590.112