Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02495 ATGAAACCTTTAGCCTTGGCCATTATTGTCCTTACCATGATGACCCTCTTGGCAAGCTCCCAGGAAGATGATGCTTCTGTAATGCTGGCCCTCAAGAACAGTCTCAACCCGCCGGGGTGGTCCGACCCGGACCCGTGCAAGTGGGACCATGTGAGATGCTCCGACGACAAACGGGTCACCCGGATCCAAATCGGGCGCCTCAACCTCCAGGGCACTCTCCCCACAACCCTCCAGAAACTCACCCGGTTAGAACACTTGGAGCTCCAATACAACAACATCTCAGGTCCCCTCCCCTCCCTCAACGGCCTAACCAGCCTCCGTGTTTTCATGGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCTCCGGCATGTCGCAGCTCCAGGCGGTGGAGATAGATAACAACCCCTTTGAGCCATGGGAGATTCCTCAGAGTCTCCGAAATGCTTCTGGGCTTCAGAACTTCTCTGCCAACTCCGCCAGCATCAGAGGCACCATCCCGGATTTCTTCAGCTCTGATGTTTTCCCTGGATTGACCCTTTTGCATTTGGCCATCAATAGCCTCGAAGGAACGTTGCCCTTGAGCTTTTCTGGGTCCCAGATTCAGTCTCTGTGGTTGAATGGACAGAAGAGTGTTAACAGGCTCGGTGGCACTGTTGAGGTTTTGCAGAACATGACTTTCTTGACCGATGTTTGGTTGCATTCTAATGCTTTCACAGGTCCCTTGCCTGATTTGTCCGGGTTGAAGAGTTTGCGTGATTTGAGTTTGAGGGATAACAGGTTTACTGGTCCTGTTCCAGGTTCATTAGTGGGTCTTAAGACACTTAAAGTTGTGAACTTGACTAATAATTTGTTTCAGGGTCCAATTCCAGTGTTTGGTGATGGGGTTGAGGTAGATAATAGTAAGGATTCAAATAGTTTTTGCTTGCCAAGTCCAGGTAATTGTGATCCTAAGGTAGAGGTTCTTCTTTCTGTTGTCGGGCCTATGGGGTATCCCCAAAGGTTTGCTGAAAGTTGGAAGGGGAATGATCCCTGTGGTGATTGGCTTGGGATTACTTGTAGTAAGGGTAATATAACTGTTGTTAATTTTCAGAAGATGGAACTTAGTGGTGTGATATCCCCTGAGTTCGCTAAACTTAAATCCTTGCAAAGGATAGTGTTAGCTGATAACAATCTCACCGGTTCGATTCCGGAGGAGCTTGCTACTTTGCCTGCGCTTACTCAATTGAATGTTGCAAATAATCAGCTTTATGGGAAGGTGCCGAGTTTTAGGAAAAATGTAGCTGTGAGTACAAGTGGTAATATTGATATAGGGAAGGATAAGAGTAGTCAATCCCCTCAGGGTCCTGTGTCTCCAATGGCTCCCAATGCAAAGGGAGAAAGTGGGGGTTCTGGAAATGGTGGCAAAAAGTCTTCATCCCATGTGGGAATAATTGTGTTTTCAGTGATTGGGGCTTTGTTTGTGGTTTCAATGATTGGTTTCTTGGTTTTCTGCTTGTTTAGGATGAAGCAAAAGAAGCTGAGCAGGGTCCAGAGCCCAAATGCGCTAGTTATTCATCCTAGGCATTCTGGATCGGATAATGAGAGTGTGAAGATAACGGTTGCCGGTTCAAGTGTCAGCATTGGTGCTGCGAGTGAAACGCGAACCATCCCCGGCAGTGAGGCAGGAGATATTCAAATGGTTGAAGCAGGAAACATGGTCATTTCCATACAAGTTCTGAAGAATGTCACTGATAATTTCAGTGAGAAGAATGTTTTGGGACAAGGAGGTTTTGGAACGGTTTATAGAGGTGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGGGCAATAGCTGGGAAGGGTGCAGCAGAATTCAAATCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGACATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTACGAGTACATGCCTCAGGGAACACTGAGTAGGCATCTTTTTAACTGGCCAGAGGAAGGACTAGAACCACTTGAGTGGAATAGAAGATTGATAATTGCCTTAGATGTGGCAAGGGGTGTCGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACATAGGGATTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTGCGTCTTGCTCCAGAAGGAAAAGCCTCTATAGAAACAAGAATTGCAGGAACATTTGGATATTTGGCGCCAGAGTATGCAGTCACTGGCCGTGTGACAACTAAAGTTGACGTGTTTAGCTTTGGGGTCATATTGATGGAGCTGATAACAGGAAGAAAAGCACTTGATGAGACTCAACCCGAGGATAGCATGCATCTAGTAACATGGTTCCGCAGAATGTCCATAAATAAGGACTCATTCCGCAAATCCATTGACTCCACAATTGAGCTCAACGAGGAAACACTTGCTAGTATTCACACAGTAGCAGAGTTAGCCGGCCACTGCTGTGCAAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTCCTTTCTTCTCTTGTGGAACTCTGGAAACCATCTGATCAGAATTCTGAAGATATATATGGCATTGACCTTGACATGTCCCTACCACAAGCACTTAAGAAGTGGCAAGCTTATGAAGGTAGAAGTCAAATGGAGTCGTCTTCTTCGTCTTCGCTTCTTCCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCTTACGGATTTGCTGATTCTTTCACATCAGCAGATGGTAGGTGA 2814 0.4655 MKPLALAIIVLTMMTLLASSQEDDASVMLALKNSLNPPGWSDPDPCKWDHVRCSDDKRVTRIQIGRLNLQGTLPTTLQKLTRLEHLELQYNNISGPLPSLNGLTSLRVFMASNNRFSAVPADFFSGMSQLQAVEIDNNPFEPWEIPQSLRNASGLQNFSANSASIRGTIPDFFSSDVFPGLTLLHLAINSLEGTLPLSFSGSQIQSLWLNGQKSVNRLGGTVEVLQNMTFLTDVWLHSNAFTGPLPDLSGLKSLRDLSLRDNRFTGPVPGSLVGLKTLKVVNLTNNLFQGPIPVFGDGVEVDNSKDSNSFCLPSPGNCDPKVEVLLSVVGPMGYPQRFAESWKGNDPCGDWLGITCSKGNITVVNFQKMELSGVISPEFAKLKSLQRIVLADNNLTGSIPEELATLPALTQLNVANNQLYGKVPSFRKNVAVSTSGNIDIGKDKSSQSPQGPVSPMAPNAKGESGGSGNGGKKSSSHVGIIVFSVIGALFVVSMIGFLVFCLFRMKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSIGAASETRTIPGSEAGDIQMVEAGNMVISIQVLKNVTDNFSEKNVLGQGGFGTVYRGELHDGTRIAVKRMECGAIAGKGAAEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLEPLEWNRRLIIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMSINKDSFRKSIDSTIELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02495 937 MobiDBLite consensus disorder prediction 437 471 - -
Pumo9g02495 937 FunFam Receptor-like kinase TMK4 22 316 - -
Pumo9g02495 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Pumo9g02495 937 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Pumo9g02495 937 SMART LRR_typ_2 80 102 IPR003591 -
Pumo9g02495 937 SMART LRR_typ_2 251 274 IPR003591 -
Pumo9g02495 937 SMART LRR_typ_2 103 126 IPR003591 -
Pumo9g02495 937 SMART LRR_typ_2 382 406 IPR003591 -
Pumo9g02495 937 MobiDBLite consensus disorder prediction 901 937 - -
Pumo9g02495 937 Pfam Leucine rich repeat 378 419 IPR001611 GO:0005515
Pumo9g02495 937 SUPERFAMILY Protein kinase-like (PK-like) 561 867 IPR011009 -
Pumo9g02495 937 Gene3D Ribonuclease Inhibitor 320 444 IPR032675 -
Pumo9g02495 937 ProSitePatterns Protein kinases ATP-binding region signature. 589 621 IPR017441 GO:0005524
Pumo9g02495 937 Pfam Protein kinase domain 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02495 937 Gene3D Phosphorylase Kinase; domain 1 544 660 - -
Pumo9g02495 937 SMART serkin_6 583 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02495 937 Gene3D Ribonuclease Inhibitor 20 318 IPR032675 -
Pumo9g02495 937 FunFam receptor protein kinase TMK1 661 878 - -
Pumo9g02495 937 SUPERFAMILY L domain-like 53 427 - -
Pumo9g02495 937 ProSiteProfiles Leucine-rich repeat profile. 82 104 IPR001611 GO:0005515
Pumo9g02495 937 MobiDBLite consensus disorder prediction 437 454 - -
Pumo9g02495 937 PANTHER OSJNBA0070M12.3 PROTEIN 6 937 - -
Pumo9g02495 937 Gene3D Transferase(Phosphotransferase) domain 1 661 881 - -
Pumo9g02495 937 FunFam receptor protein kinase TMK1 545 660 - -
Pumo9g02495 937 ProSiteProfiles Protein kinase domain profile. 583 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02495 937 Pfam Leucine rich repeat N-terminal domain 324 357 IPR013210 -
Pumo9g02495 937 Pfam Leucine rich repeat N-terminal domain 22 54 IPR013210 -
Pumo9g02495 937 CDD STKc_IRAK 589 862 - -
Pumo9g02495 937 MobiDBLite consensus disorder prediction 901 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02495 Pumo-Chr9 59618452 59622732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02495 68 865 Receptor kinase-like Gene Family AT5G07280 31.363 7.14e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo9g02495 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02495 K00924 - gmx:100789646 1726.06