Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g02491 | ATGATGAGTGCTTCTTCCTCCAGAAAAGTGAACAAGGATGAACAAGTGGCACAACGTAAAATTCACAAGCCAAGGTGGCTTGAGGCTTTTCTGAGAAAAACGTTCTTTGACTCATGTGCATCTCATCCATTTCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCGATTTGTCAGCTTGCCAATATTGTGTTACATTAGGTCCTCATCGTCATCACAAGATACTTAAAATTTATAGACATGTTTACAAGGATGTTGTCTCCCTTACAACTATGGAAAAATATATTGACAGCTCACAAATTCAGCCTTACAAATGCAACAAGCGACTAGTTATTTCTCTGAATCCTCTCCCACATTCTGGTTCAACAACAAATAATGAGGCATCATGCAATATTTGCAATAGGAAATTGACTGAACCCGATTTATATCGCTATTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTTAAGTAAGCTTGATGATTCAGTTCCTCCTTTCATTTCCATCGAGACTCCTCATCCTCTTTCCCCTCCTCAGCAAAAGCAAGAGGAAACTTCTGAACCCCAAAAGCTGCAAAAGAGAAAAAGAAAGGGAATACCCCACAGAGCTCCCTTCTTCTAA | 621 | 0.3897 | MMSASSSRKVNKDEQVAQRKIHKPRWLEAFLRKTFFDSCASHPFRRNELNKYCINCDLSACQYCVTLGPHRHHKILKIYRHVYKDVVSLTTMEKYIDSSQIQPYKCNKRLVISLNPLPHSGSTTNNEASCNICNRKLTEPDLYRYCSISCKVKAVLSKLDDSVPPFISIETPHPLSPPQQKQEETSEPQKLQKRKRKGIPHRAPFF | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g02491 | 206 | CDD | Bbox2 | 39 | 78 | - | - | |
Pumo9g02491 | 206 | Pfam | PLATZ transcription factor | 80 | 152 | IPR006734 | - | |
Pumo9g02491 | 206 | ProSiteProfiles | Zinc finger B-box type profile. | 39 | 78 | IPR000315 | GO:0008270 | |
Pumo9g02491 | 206 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 18 | 205 | - | - | |
Pumo9g02491 | 206 | SUPERFAMILY | B-box zinc-binding domain | 39 | 81 | - | - | |
Pumo9g02491 | 206 | MobiDBLite | consensus disorder prediction | 167 | 206 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g02491 | Pumo-Chr9 | 59554729 | 59559358 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Pumo9g02491 | PLATZ | 2.6e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g02491 | - | - | tcc:18601328 | 284.648 |