Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02491 ATGATGAGTGCTTCTTCCTCCAGAAAAGTGAACAAGGATGAACAAGTGGCACAACGTAAAATTCACAAGCCAAGGTGGCTTGAGGCTTTTCTGAGAAAAACGTTCTTTGACTCATGTGCATCTCATCCATTTCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCGATTTGTCAGCTTGCCAATATTGTGTTACATTAGGTCCTCATCGTCATCACAAGATACTTAAAATTTATAGACATGTTTACAAGGATGTTGTCTCCCTTACAACTATGGAAAAATATATTGACAGCTCACAAATTCAGCCTTACAAATGCAACAAGCGACTAGTTATTTCTCTGAATCCTCTCCCACATTCTGGTTCAACAACAAATAATGAGGCATCATGCAATATTTGCAATAGGAAATTGACTGAACCCGATTTATATCGCTATTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTTAAGTAAGCTTGATGATTCAGTTCCTCCTTTCATTTCCATCGAGACTCCTCATCCTCTTTCCCCTCCTCAGCAAAAGCAAGAGGAAACTTCTGAACCCCAAAAGCTGCAAAAGAGAAAAAGAAAGGGAATACCCCACAGAGCTCCCTTCTTCTAA 621 0.3897 MMSASSSRKVNKDEQVAQRKIHKPRWLEAFLRKTFFDSCASHPFRRNELNKYCINCDLSACQYCVTLGPHRHHKILKIYRHVYKDVVSLTTMEKYIDSSQIQPYKCNKRLVISLNPLPHSGSTTNNEASCNICNRKLTEPDLYRYCSISCKVKAVLSKLDDSVPPFISIETPHPLSPPQQKQEETSEPQKLQKRKRKGIPHRAPFF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02491 206 CDD Bbox2 39 78 - -
Pumo9g02491 206 Pfam PLATZ transcription factor 80 152 IPR006734 -
Pumo9g02491 206 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
Pumo9g02491 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 18 205 - -
Pumo9g02491 206 SUPERFAMILY B-box zinc-binding domain 39 81 - -
Pumo9g02491 206 MobiDBLite consensus disorder prediction 167 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02491 Pumo-Chr9 59554729 59559358 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo9g02491 PLATZ 2.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02491 - - tcc:18601328 284.648