Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02482 ATGGATGCTCCGGTTAAGAAAAAGCCATTGTCTCGTGCTAGCTTGAGTCCCCAGAGGAAAGAAAAGTTCCTAGTGTTTCCCCTTGTGAGGTATAATGAATTCCGGCAGCCTGTTTGCCAGGCTTGTAATGTGGTTATGTTGGAGTCAATACGTGCACATCTAGCTTCTCCTGAGCATAATGAGGTAATGGAAAAACTGAAAGCTAATGCTGCTGGATCAACTGAAGATAAGAATGCAAAGCCAGTTACTGGTACCAACTCTCCCAAGGTTAATCCAGAACAACCTCGAGACGCAGAATGCAAACTGCCTGAATTTTCACAAGATGTGCCTAAACATCAGTCACCATCTGCGCTTCCACGAGATTTTTGTGATGACAGTGGTAAAATGAGGACAAGATCTGTTTCAAAAGTTACTGAAATGATGGATCCTCCTAAAGAACAAGAACACTGGGAATCCAACAACGGCTCTGCGAGGATGAAATCCAAAGTTTCACCTTCCACAGATGAAGCTTTGACATCTTCAAAACGTGGAAGACCACGAAAAACAAAGCCTACCAAGTTCGTAATCAACCAGACATCTAATCCCCAATCATCACCCCGAAGATCTAAAAGAATCAAGCATGTGGCAGATAAAACTGCCAACAATGTGCCCGAAGTATCTTCATCCGAGGAATTAATGAAGGTAAAATTACTTACATCACTACTTGTCAAGGGACGTACTGCAGAAAATTCACAAGTAGATGGCAAAGAAGTCTCTTCAGATATCGATGCCTTAGTAATCTACAAAAGAAAAAGACTACCTCGAAGGAGGTCTTCTGGTCAAATTAGCAAGTCCCCAAAGAAAACTGCTCCTACAGAGCCTCCAACTGCTGCAATTTCAAGCTCTACTACTGCGTCACCCCCTCATCAAGATCCTCCTGCAGCTACTCCAGCCAACGTCGATGCTCCTCATATTGAAAATACAAATACTGCCGAGCCAGTATTGAGTAAAAGCCTTGTCGAAGAGGTCGAGAAGGTGAACCCTGCTCCAGCCAATGCTCAAGAACAGGTTGCTTCCAGCAAGGGTCAAGAATCTCCAGATCAAGTTGACCCAAAGGCTGATGAAGTCTCTACTGGAAACACCCCACTTGATCTAGAAGCCATTAACAAAATGATCGAAGATGACCCTTTGAGTGCTATTGAAAATATCCTGACAGGGAAGGTTTCCATTTCTTCTAAGACTCCACAATCTATCACTCAGTCAGAACCACCAAAAGTTGAAAGCTCCCCTGCAGATGTTATGTCAAAAGAGCTAAAAGACTTAATGCAGACCTTTAGGTTAGGTGATTTTGTTACAGACTATGAACAAATGTCAAAGGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAAGTTTCTTTCTCATGACCAACAAGCATTCATAAAGGCCTTCAGACTCTTCTTCAACAATGCTATTACTCACCGCAAAGAATGTGATACGGCTGGAATAAAGAAAGTCGAGTTGAACCAAGCTAAAGAAGATATCCTTCACAAACTGCAAGAAGTTAAAAATACACAGGAGCAAATCACAATGTCCATTTCAAATGCCAACAACAGGGTCAATGAAATATCTTCTTGTATTGAACAACTTGAAGAACAGTTATCCAAACTGAAGGAAGAGAGGGAGACCGTTCTGTTGGCTATTAATGAAGGCGAGAAACAAAGGGAGACATTGAAGAATGATAGCATCTTATGGGCTCATCAGGCTAAAGACCTGGTTTTTGATCTTGCAGAGATTGAGGCCAAAGAAAAAACCCTTGCACAGCAACTTGAAGCAGACAATGATGCATATGACCAATTTAAAGCATCCTTTCCTTTTTAA 1863 0.4187 MDAPVKKKPLSRASLSPQRKEKFLVFPLVRYNEFRQPVCQACNVVMLESIRAHLASPEHNEVMEKLKANAAGSTEDKNAKPVTGTNSPKVNPEQPRDAECKLPEFSQDVPKHQSPSALPRDFCDDSGKMRTRSVSKVTEMMDPPKEQEHWESNNGSARMKSKVSPSTDEALTSSKRGRPRKTKPTKFVINQTSNPQSSPRRSKRIKHVADKTANNVPEVSSSEELMKVKLLTSLLVKGRTAENSQVDGKEVSSDIDALVIYKRKRLPRRRSSGQISKSPKKTAPTEPPTAAISSSTTASPPHQDPPAATPANVDAPHIENTNTAEPVLSKSLVEEVEKVNPAPANAQEQVASSKGQESPDQVDPKADEVSTGNTPLDLEAINKMIEDDPLSAIENILTGKVSISSKTPQSITQSEPPKVESSPADVMSKELKDLMQTFRLGDFVTDYEQMSKVLLILEELQKNEKFLSHDQQAFIKAFRLFFNNAITHRKECDTAGIKKVELNQAKEDILHKLQEVKNTQEQITMSISNANNRVNEISSCIEQLEEQLSKLKEERETVLLAINEGEKQRETLKNDSILWAHQAKDLVFDLAEIEAKEKTLAQQLEADNDAYDQFKASFPF 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02482 620 MobiDBLite consensus disorder prediction 70 222 - -
Pumo9g02482 620 PANTHER UNCHARACTERIZED 1 619 IPR040050 GO:0003676|GO:0005681|GO:0008270
Pumo9g02482 620 MobiDBLite consensus disorder prediction 185 199 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 238 326 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 404 425 - -
Pumo9g02482 620 Coils Coil 527 568 - -
Pumo9g02482 620 Coils Coil 499 522 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 276 302 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 345 359 - -
Pumo9g02482 620 Coils Coil 590 610 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 156 172 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 404 419 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 76 92 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 341 374 - -
Pumo9g02482 620 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02482 Pumo-Chr9 59438115 59441827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02482 1 72 C2H2 Transcription Factor Family AT3G02860 50.000 9.97e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02482 - K13104 gmx:100815983 1011.91