Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02475 ATGAAGTCCGCGCCGGTCAAACAACCGATTCCGTTAGTGTTAGCGTTAGTGTTTACTCTCTTAACCATTGCAGGTTCGGATCTAGCTTTGGACAGAGCGGCGTTATTGTCACTCCGAAGCGCGGTGGGTGGACGCACGCTGTTATGGAACGTGACCCAAACAAGCCCTTGTTTATGGACCGGCGTGGTTTGTGCCAGCGGGAGAGTAACCATGCTGCGTCTTCCCGCGATGGGTCTCTCCGGTTCGCTCCCCTCCGGTTTGGGCAACCTCACCGAACTGCAGACACTCTCTCTCCGGTTCAACGCGCTAACCGGACGAATCCCCGAGGATTTCGCGAACCTGAAAGCTCTCCGGAACCTCTATTTGCAGGGAAACTTCTTCTCCGGCGAGGTCCCCGATGCGGTGTTCGTGCTGCAGAATCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCGCCGAAATTCAATAGCCTCACTCGTTTGGACACTCTTTATTTAGAACTCAACAATTTCACTGGCTCAATCCCTGACCTTGCTCCACCGCTTGGTCAGTTTAACGTCTCGTTTAATTCGCTAACCGGATCCATTCCGAACCGATTTTCGCGTTTGAACCAAAGTGCGTTTGTCGGAAACTCGCTCTGCGGGAGGCCCTTGCAGCTTTGCCCCGGAACTGAGGAGAAGAAGAGTAAATTATCCGGTGCTGCCATTGCGGGTATCGTGATTGGTTCTGTGGTTGGTGTGTTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAGAGGAATCAGAAAAACGAAACTGTGCCACCTGAGAAGCGTGTTGTGGAAGGTGAAGTGTCTCGTGAAAAGAGTGCCGAGAGTGCTGGGAATTCAGGTTCGGCAGTGGCAGGTTCGGTGGAGAAGAGTGAGGTTCGGAGTAGTGGCAGTGGAGATAAAAGTTTGGTGTTTTTTGGGAATGTGAGTAGAGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCTGAAGTTTTAGGTAAAGGCACGTTTGGGACGACTTATAAGGCGACATTGGAGATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCAACAGAGAGGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGTTTCATCACAACTTGGTCCCACTAAGGGGTTATTACTTTAACAAGGATGAGAAGCTTCTTGTGTATGATTACATGCCTATGGGAAGCTTATCTGCTCTATTACATGCAAATGGTGGAGTGGGGAGGACTCCATTGAATTGGGAAACAAGGTCTGCCATTGTCCTTGGCGCTGCTCGTGGGATTGCATACATTCATTCACATGGCCCAACATCCTCCCATGGAAACATCAAGTCATCAAATATCCTTCTCACCAAAACTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTCACCTTGCTCTCCCAACATCTACACCAAACCGTGTTTCTGGTTACCGTGCGCCAGAGGTCACTGATGCGCGCAAAATATCCCAAAAAGCAGATGTCTATAGCTTTGGTATCCTGCTTTTGGAGCTGCTAACAGGGAAGGCTCCTACTCATTCTTCACTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTGGTTCAAGATGAGTGGAACACTGAGGTATTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTCAAGCTCTTGCAGCTTGCCCTTGAATGTGCTGCTCAATACCCTGATAAGAGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAGGAAATTTGTCATCCTAGTTTAGAGAAAGAGGAAGGGAAGAATCATGATTTTAAAGATGCTGATAATGGATTTTCCCAACAGTACTATTCTGTTGACTCGGGTGTGCCACAAGCTTGA 1923 0.4857 MKSAPVKQPIPLVLALVFTLLTIAGSDLALDRAALLSLRSAVGGRTLLWNVTQTSPCLWTGVVCASGRVTMLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGRIPEDFANLKALRNLYLQGNFFSGEVPDAVFVLQNLVRLNLGNNNFSGEISPKFNSLTRLDTLYLELNNFTGSIPDLAPPLGQFNVSFNSLTGSIPNRFSRLNQSAFVGNSLCGRPLQLCPGTEEKKSKLSGAAIAGIVIGSVVGVLLILLLLFFLCRKRNQKNETVPPEKRVVEGEVSREKSAESAGNSGSAVAGSVEKSEVRSSGSGDKSLVFFGNVSRVFSLDELLRASAEVLGKGTFGTTYKATLEMGVSVAVKRLKDVTATEREFREKIEQVGKMFHHNLVPLRGYYFNKDEKLLVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIVLGAARGIAYIHSHGPTSSHGNIKSSNILLTKTFEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDARKISQKADVYSFGILLLELLTGKAPTHSSLNEEGVDLPRWVQSVVQDEWNTEVFDMELLRYQSVEEEMVKLLQLALECAAQYPDKRPSMDVVASKIEEICHPSLEKEEGKNHDFKDADNGFSQQYYSVDSGVPQA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02475 640 Pfam Protein kinase domain 338 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02475 640 MobiDBLite consensus disorder prediction 288 313 - -
Pumo9g02475 640 MobiDBLite consensus disorder prediction 271 313 - -
Pumo9g02475 640 MobiDBLite consensus disorder prediction 623 640 - -
Pumo9g02475 640 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
Pumo9g02475 640 PANTHER OS05G0588300 PROTEIN 14 608 - -
Pumo9g02475 640 Gene3D Ribonuclease Inhibitor 31 136 IPR032675 -
Pumo9g02475 640 MobiDBLite consensus disorder prediction 271 287 - -
Pumo9g02475 640 Gene3D Phosphorylase Kinase; domain 1 302 409 - -
Pumo9g02475 640 CDD STKc_IRAK 341 604 - -
Pumo9g02475 640 FunFam pollen receptor-like kinase 1 304 409 - -
Pumo9g02475 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pumo9g02475 640 FunFam Probable inactive receptor kinase RLK902 28 183 - -
Pumo9g02475 640 FunFam Probable inactive receptor kinase At1g48480 410 612 - -
Pumo9g02475 640 ProSiteProfiles Protein kinase domain profile. 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02475 640 SUPERFAMILY L domain-like 46 208 - -
Pumo9g02475 640 SUPERFAMILY Protein kinase-like (PK-like) 339 599 IPR011009 -
Pumo9g02475 640 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Pumo9g02475 640 MobiDBLite consensus disorder prediction 609 640 - -
Pumo9g02475 640 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02475 Pumo-Chr9 59352748 59356139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02475 27 604 Receptor kinase-like Gene Family AT1G48480 58.401 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo9g02475 Pkinase 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02475 - - gmx:100801103 1046.96