Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02456 ATGATGAGTTTGTGTTCCTCTCAAGGAACCTGTTCTGGTGACACCAAGGGTGTTTCTGTTTCCAATGCACGCGTTTCCTCTTCTGCTGTTGGAAATGACTCTTCTTCTGACTACAAAAGGCACAACAAACTCATAGCCTTTTTGAAAAAAACCATGTGGGAGTTTGCCTTGGCATGTGTTGGTGTTGTTCCTTGTGGTGGCTATAACGACCTTAACGGTCAAAGGAAGACAACTTTGGAGCATAACAAGGCGTGGTTGCTGGTGGAGTCTGGAGCAGAATTGGCAAGTGCTGAACCTCAATCGGTTCACTCGTCTTTTAGGTTCAGCTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCTGCTGCAACCTTTTTGATGGTGAATTTGGACTATGAATCTCAAGTGAGGGAGTTGAAATGGAGGAGAATACAGTCACTGGAGAAAAGCCTGTCTCCGGTTGCCAACACTATGATCAGGTTCAGCTATGATGAAGTTGTGTCTGCTACTCGCAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTTGCAGGACTGCCATTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCACAACACAAATGTTGTTCCTCTTGTGGGTTTTTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGGGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGAGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTAAGGTATAAAGTTGCAATTGGGATTGCAGAAGCGGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAATATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGACTAGCTTCATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCCAAAAGACCCCCTGGAGAGGAAAACTTGGTAGTATGGGCTAAACCTTTGCTTAGAAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAAGTAAAGTACAATTCGAGTTACACGGATCAAATGGCTCGGATGGTTGATGCAGCTGCTGCATGTGTTACAAATGAAGAATCTAGGAGGCCTAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTCGAGCCTGTCTTCTCTAGAAGAAGGAAGTCTGGCTATTTTGGTAATGGATATGTGATTGATTATTACCCTCAGTTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGATGATTATCTCTATGGTCGTTGA 1563 0.4331 MMSLCSSQGTCSGDTKGVSVSNARVSSSAVGNDSSSDYKRHNKLIAFLKKTMWEFALACVGVVPCGGYNDLNGQRKTTLEHNKAWLLVESGAELASAEPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMVNLDYESQVRELKWRRIQSLEKSLSPVANTMIRFSYDEVVSATRNFSKERVLGRGALSCVFRGRVGLCRTAIAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKSVKGSSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVVWAKPLLRKGKGAIEELLDPQVKYNSSYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVFSRRRKSGYFGNGYVIDYYPQLQQTNNEMKSHLALAMLGVPECEDDDYLYGR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02456 520 SMART serkin_6 181 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02456 520 SUPERFAMILY Protein kinase-like (PK-like) 161 462 IPR011009 -
Pumo9g02456 520 PANTHER OS01G0750732 PROTEIN 30 466 - -
Pumo9g02456 520 FunFam Putative receptor-like serine/threonine-protein kinase 259 476 - -
Pumo9g02456 520 Pfam Protein kinase domain 181 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02456 520 Gene3D Phosphorylase Kinase; domain 1 166 258 - -
Pumo9g02456 520 FunFam probable serine/threonine-protein kinase PBL7 142 258 - -
Pumo9g02456 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Pumo9g02456 520 ProSiteProfiles Protein kinase domain profile. 181 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02456 520 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02456 Pumo-Chr9 58891055 58894227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02456 162 464 Trihelix Transcription Factor Family AT1G70460 40.328 3.61e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pumo9g02456 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02456 - - gmx:100802176 936.021