Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02451 ATGATGAGTTTGTGTTCCTCTCAAGGAACCTGTTCTGGTGGTGACACCAAGGGTGTTTGTGTTTGTGTTTCCAATGCACACGTTTCCTCTTCTGCTGTTGGAAATGACTCTTCTTCAGACAACAAAAGGCACAACAAACTCATAGCCTTTTTGAAAAAAACCATGTGGGAGTTTGCCTTGGCTTGTGTTGGTGTTGTTCCTTGTGGTGGCTATAACGACCTTAACGGTCAAAGGAAGACAACTTTGGAGCATAACAAGGCGTGGTTGCTGGTGGAGTCTGGAGCAGAATTGGCAAGTGCTGAACCTCAATCGGTTCACTCGTCTTTCAGGTTCAGCTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCTGCTGCAACCTTTTTGATGGTGAATTTGGACTATGAATCTCAAGTGAGGGAGTTGAAATGGAGGAGAATACAGTCACTGGAGAAAAGCCTGTCTCCGGTTGCCAACACTATGATCAAGTTCAGCTATGATGAAATTGTGTCTGCTACTCGCAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTTGCAGGACTGCCGTTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCACAACACAAATGTTGTTCCTCTTGTGGGTTTTTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGGGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGAGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTAAGGTATAAAGTTGCAATTGGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAATATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGACTAGCTTCATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCCAAAAGACCCCCTGGAGAGGAAAACTTGGTAGTATGGGCTAAACCTTTGCTTAGAAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAAGTAAAGTACAATTCGAGTTACACGGATCAAATGGCTCGGATGGTTGATGCAGCTGCTGCATGTGTTACAAATGAAGAATCTAGGAGGCCTAGCATAGGTGAGATTGTTGCAATATTGAAAGGTGAAGTAGAGCCTGTCTTCTCTAGAAGAAGGAAGTCTGGCTATTTTGGTAATGGATATGTGATTGATTATTACCCTCAGTTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGATGATTTTCTCTATGGTCGTTGA 1572 0.4313 MMSLCSSQGTCSGGDTKGVCVCVSNAHVSSSAVGNDSSSDNKRHNKLIAFLKKTMWEFALACVGVVPCGGYNDLNGQRKTTLEHNKAWLLVESGAELASAEPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMVNLDYESQVRELKWRRIQSLEKSLSPVANTMIKFSYDEIVSATRNFSKERVLGRGALSCVFRGRVGLCRTAVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKSVKGSSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVVWAKPLLRKGKGAIEELLDPQVKYNSSYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVFSRRRKSGYFGNGYVIDYYPQLQQTNNEMKSHLALAMLGVPECEDDDFLYGR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02451 523 FunFam Putative receptor-like serine/threonine-protein kinase 262 479 - -
Pumo9g02451 523 FunFam probable serine/threonine-protein kinase PBL7 145 261 - -
Pumo9g02451 523 PANTHER OS01G0750732 PROTEIN 28 469 - -
Pumo9g02451 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Pumo9g02451 523 ProSiteProfiles Protein kinase domain profile. 184 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02451 523 SMART serkin_6 184 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02451 523 Gene3D Phosphorylase Kinase; domain 1 169 261 - -
Pumo9g02451 523 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
Pumo9g02451 523 Pfam Protein kinase domain 184 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02451 523 SUPERFAMILY Protein kinase-like (PK-like) 164 465 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02451 Pumo-Chr9 58843408 58846564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02451 165 467 Trihelix Transcription Factor Family AT1G70460 40.656 2.04e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pumo9g02451 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02451 - - gmx:100802176 935.25