Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02446 ATGGCCACAAAATCTGAAGGCATCCAAGAAGAAGAAATGTCAAGTATGGAAGAGGGTATTTCCCCTAGCCCTTCCAAAACCTGTAACATATTACATAACTGTTGTTCAAACCATGTTGTAACCCTCGCACAGAAGGTGATTGCAGAAGTCATTGGCACATATTTTGTGATATTTGGCGGTTGTGGCTCTGTGGCAGTGAATAAGATCTATGGTTCTGTGACATTTCCTGGGGTTTGTGTGACATGGGGGCTGATTGTAATGGTCATGATTTACTCTGTTAGTCATATCTCTGGAGCTCACTTCAATCCTGCAGTCACCATCACTTTGGCCATCTTTCGCCGCTTCTCATATAAACAGGTGCCACTCTACATTTTTGCTCAGTTGCTGGGGTCGATACTTGCAAGTGGCACATTGGCCCTAATGTTGGATGTAACGCCTAAAGCTTACTTTGGAACGGTACCAGTTGGATCCAATGGCCAGTCTTTAGTTGCTGAAATCATCATCACCTTTCTCTTGATGTTTGTTATATCTGCTGTTTGTACAGATGACAGAGCGGTGGGTGACTTTGCAGGAGTTGCAGTTGGGATGACTATTATGTTGAATGTCTTCATTGCCGGGCCTGTATCAGGAGCTTCCATGAACCCTGCAAGAAGTATTGGTCCTGCGCTGATCAAACATGTTTACAAAGGGTTATGGGTATACGTAGTTGGTCCAATTGTTGGAGCCATAGCTGGAGCACTTGCCTATAACTTTCTCAGATCCACGGAAAAGCCACCTTCAGAGTAA 786 0.444 MATKSEGIQEEEMSSMEEGISPSPSKTCNILHNCCSNHVVTLAQKVIAEVIGTYFVIFGGCGSVAVNKIYGSVTFPGVCVTWGLIVMVMIYSVSHISGAHFNPAVTITLAIFRRFSYKQVPLYIFAQLLGSILASGTLALMLDVTPKAYFGTVPVGSNGQSLVAEIIITFLLMFVISAVCTDDRAVGDFAGVAVGMTIMLNVFIAGPVSGASMNPARSIGPALIKHVYKGLWVYVVGPIVGAIAGALAYNFLRSTEKPPSE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02446 261 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Pumo9g02446 261 PANTHER AQUAPORIN NIP2-1 12 257 IPR034294 -
Pumo9g02446 261 MobiDBLite consensus disorder prediction 1 22 - -
Pumo9g02446 261 NCBIfam MIP family channel protein 48 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 Pfam Major intrinsic protein 40 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 195 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 232 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 CDD MIP 44 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g02446 261 Gene3D Glycerol uptake facilitator protein. 4 260 IPR023271 -
Pumo9g02446 261 SUPERFAMILY Aquaporin-like 38 257 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02446 Pumo-Chr9 58757097 58759573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02446 1 261 Major Intrinsic Protein MIP AT5G37820 64.122 4.97e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02446 K09874 - gmx:100791338 470.314