Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02420 ATGGCAAAAACAAAAACAGCCATTCTTCTTGTTTTCACCGTCCTTTTAGCTTCAAGCTCCCAACAGCAAGAGCTATTCTTCGAAGGGTTCCAAGGCGCCGCTAACATAACCACAAACGGAGTCGCGGTAATCGAACACAACGGCATACTCAGCCTCACAAACGACACTCACAAACTCGGCCACGCGTTTTACTCAACCCCAATAAAGTTCAAAAACTCCACCACCGGCAATGTTTTCTCCTTTTCCACCGCTTTCGCGTTCGCAATAACGAGCCGCGAACCCAAACAAGGTGGCCACGGCTTCGCCTTCGCGGTTTCCCCTTCAAAAGAGCTTCACGGCGCGTACCCGGCTCAGTACCTGGGACTCTTCTCGCCCCACGATGCTGGGAACTTCTCCAACAACAACCACGTTTTCGCGGTGGAGTTTGACACTGTCATGAACTATGAACTTTACGACATCAACGACAACCACGTGGGGGTTAACGTGAACAGCGCGGTGTCTAACAAGTCTGTCACCGCGGCTCACTTCACCGACGGGTCATCCAAGCAAAACCTCAATTTGAAGTCCGGCAAAGTGATTCAGGCGTGGGTGGACTATGATTCCTCGAAGAAACAATTAGATGTTAGACTTTCCTTAACCTCGTCGAAACCTAGTTCACCTATCTTGTCTTGCCAACTCGACCTCTCATCCATTTTTCACGAAAACATGTATGTCGGGTTTTCAGCTTCAACAGGGTTGCTATCAAGTTCACACTATATCCTAGGTTGGAGCTTTAACATGAATGAAGAAGCCAAATCTCTGCATTTGGAAACATTACCCTCACTCCCCAAGCCCAAGAACCGCAAAAAGCTCATGATGTTGGGGGTAGCTGTGTGTTTTGCTATTCTGACAACAATAGTTGCAATTGGGTTTGTGATTTATGTGGTGAGAAGGATGAAGAATGATGCTATTGAACCATGGGAGCTTGAAGTTGGTCCTCATAGATTCTCATACGAGGAGATAAAAAAAGCAACATATGGCTTCAAGGAGAAACAGTTAATCGGATTTGGAGGTTTCGGTCGAGTTTACAAAGGGATTCTCGCAGAGTCCAATACTGTAGTTGCAGTGAAGAGAATCACTCAAGACTCAAAGGAAGGGTTGCAGCAATTCATGTCGGAGATTGCAACCATTGGTCGGCTCCGACACAGGAACATAGTTCAACTACGAGGTTGGTGTCGGAAAAGGTGCGATCTTTTACTAGTTTACGATTATATGCCGAATGGGAGTTTGGACAAGTACCTATTCGATGAACCCAGAAGGATTTTGAGTTGGGAACAGAGGTTTAAGATTATAAAGGACGTGGCTTGGGGTTTGGTGTATTTACATGAAGAGTGGGAACAAGCGGTGATTCATAGAGATGTTAAAGCTGGGAATGTGTTGTTGGATTCGGAGATGAATGGGAGGCTTGGGGATTTTGGATTAGCGAAGATGTACGAGCACGGGGAGAATCCGAACACCACGCGCGTGGTGGGCACGTTGGGGTACCTGGCGCCGGAGCTCACGCGCACGGGGAAGCCCACGGCGAGTTCCGACGTGTTCGCGTTTGGGGCTTTGTTGTTGGAGGTGGCGTGCGGGAGAAGGCCCTTTGAGCCCAAGGCGTTGCCGGAGGAGCTTATTTTGGTTGATTGGGTTAAGGACTGGTCGCGCGTGGGGCGGGTTTTGGAGGTGGTGGATTCTAAGTTGGGTGGGGCTTTTGATCCGGTGCAGGCCTTGGTGGTGCTGAGATTGGGCCTCATGTGTTCGAGTGATGGCCCAGAAGAGAGGCCCAGCATGAGGCACGTGGTGATGTATTTGGAAGGGGAGATGCAGCTTCCTAAAGATGGTGGCGGTGAAGTTGAGGAGGCAACGACGTCGTTTTATGATAGGGTGAGCATTTGGTCTTGTACTCCCGAGGATGTTGATGCTTCCTCGCTTTCACTTTCCGGTGATCCGGAGGGGAAGTAG 1983 0.4937 MAKTKTAILLVFTVLLASSSQQQELFFEGFQGAANITTNGVAVIEHNGILSLTNDTHKLGHAFYSTPIKFKNSTTGNVFSFSTAFAFAITSREPKQGGHGFAFAVSPSKELHGAYPAQYLGLFSPHDAGNFSNNNHVFAVEFDTVMNYELYDINDNHVGVNVNSAVSNKSVTAAHFTDGSSKQNLNLKSGKVIQAWVDYDSSKKQLDVRLSLTSSKPSSPILSCQLDLSSIFHENMYVGFSASTGLLSSSHYILGWSFNMNEEAKSLHLETLPSLPKPKNRKKLMMLGVAVCFAILTTIVAIGFVIYVVRRMKNDAIEPWELEVGPHRFSYEEIKKATYGFKEKQLIGFGGFGRVYKGILAESNTVVAVKRITQDSKEGLQQFMSEIATIGRLRHRNIVQLRGWCRKRCDLLLVYDYMPNGSLDKYLFDEPRRILSWEQRFKIIKDVAWGLVYLHEEWEQAVIHRDVKAGNVLLDSEMNGRLGDFGLAKMYEHGENPNTTRVVGTLGYLAPELTRTGKPTASSDVFAFGALLLEVACGRRPFEPKALPEELILVDWVKDWSRVGRVLEVVDSKLGGAFDPVQALVVLRLGLMCSSDGPEERPSMRHVVMYLEGEMQLPKDGGGEVEEATTSFYDRVSIWSCTPEDVDASSLSLSGDPEGK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02420 660 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02420 660 SUPERFAMILY Protein kinase-like (PK-like) 323 614 IPR011009 -
Pumo9g02420 660 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Pumo9g02420 660 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Pumo9g02420 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pumo9g02420 660 FunFam serine/threonine-protein kinase PBS1-like 308 417 - -
Pumo9g02420 660 ProSiteProfiles Protein kinase domain profile. 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02420 660 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Pumo9g02420 660 CDD STKc_IRAK 347 613 - -
Pumo9g02420 660 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Pumo9g02420 660 PANTHER - 19 618 - -
Pumo9g02420 660 FunFam L-type lectin-domain containing receptor kinase S.4 21 266 - -
Pumo9g02420 660 Pfam Protein kinase domain 341 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02420 660 FunFam L-type lectin-domain containing receptor kinase S.4 418 622 - -
Pumo9g02420 660 Gene3D - 24 273 - -
Pumo9g02420 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 279 IPR013320 -
Pumo9g02420 660 Pfam Legume lectin domain 25 272 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02420 Pumo-Chr9 58359403 58361687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02420 19 619 Receptor kinase-like Gene Family AT3G55550 57.938 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g02420 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02420 - - jre:108982661 812.757