Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02417 ATGGCGAATCGTTGGTGGGCCGGGAACGTGGCGGTGAGTCCCAATGAACCAAACTCATCGCTTCAGCAAGACAACGGTGACAGCAGCAACACCAACAACAACGCTACTCCGACCAACAGCGGCAACAGTAACACCAACGTTAACGCGGTTGTCGAGGACGACGCCAACACCAACGAGCGTGACGGCGACGAGCAGAACCTCAGCAGCGGTCGGCGGCCACGTGGCAGGCCGCCGGGGTCGAAGAACAAGCCGAAGCCGCCGGTGGTGATAACCAAGGAGAGCCCCAACGCGCTCCGCAGCCACATCCTCGAAATCAGCGGCGGCAGCGACGTCGCGGAGTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGCGTCTCGGTCCTCAGCGGCAACGGCGTCGTCACCAACGTCACGCTCCGGCAGCCGGCGGCGCCGGGCGGGGTCATCACTCTCCAGGGGAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTGCCGGCGCCGTCCCCGCCGGAGGCCACCGGACTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTCGTCGGAGGGAGCGTGGTGGGGCCCCTCATCGCCTCGGGACCCGTGATGGTGGTTGCTGCTACTTTTGCTAATGCTACCTATGAAAGGTTACCTTTGGAGGATGAACAAGGTGAAGAGGACATGCAAGAGGTGAATGAAGGTGGTGGAACACCACCACCACCACCACCTTCACAAGTTGAACAGGTTCCAATGCCGGTGTATAATTTGGTGCCTAATAACGGTGATGTGTTTTGGGGGCCTCCACCTCGCCCTCCACCTCCACCTTCTAGTTATTGA 840 0.6214 MANRWWAGNVAVSPNEPNSSLQQDNGDSSNTNNNATPTNSGNSNTNVNAVVEDDANTNERDGDEQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIATFATRRHRGVSVLSGNGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLIASGPVMVVAATFANATYERLPLEDEQGEEDMQEVNEGGGTPPPPPPSQVEQVPMPVYNLVPNNGDVFWGPPPRPPPPPSSY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02417 279 CDD DUF296 99 182 IPR005175 -
Pumo9g02417 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Pumo9g02417 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 243 IPR014476 GO:0003680
Pumo9g02417 279 ProSiteProfiles PPC domain profile profile. 95 233 IPR005175 -
Pumo9g02417 279 MobiDBLite consensus disorder prediction 224 279 - -
Pumo9g02417 279 MobiDBLite consensus disorder prediction 1 93 - -
Pumo9g02417 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Pumo9g02417 279 MobiDBLite consensus disorder prediction 12 53 - -
Pumo9g02417 279 MobiDBLite consensus disorder prediction 54 70 - -
Pumo9g02417 279 Gene3D - 98 231 - -
Pumo9g02417 279 FunFam AT-hook motif nuclear-localized protein 98 226 - -
Pumo9g02417 279 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02417 Pumo-Chr9 58333015 58334832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02417 71 240 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 72.941 1.12e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02417 - - gmx:100787100 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00171 1 2811024 2812293 Pumo9g02417 9 58333015 58334832 PCT