Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02414 ATGGCTGGGATTTGCTGTGGCGTTGTTGGAGAGCCCGGAGAGACTCCTTCTCTGATCGAACCCACCTCGCGCCCTTCCGCTCGCCGGAGTTTGGACCTTTTGCCTCTGAAATACATAGCTGCTGACGTGGCAATCCCCGCGCCGGAGAGTAGCCGGAAGCGCCAGAAGCTGGATCAGTGCGCTTCTCCGGCGAGGGAGTGCGAAAACGCGGTTCAGAGTTCCGAATCGAAGGTAGTTGAAGATGTTTCGCTTCCGAATTGTTCCAAGATTCCAACGTTGGACTCGACAAATCCAACAGTTGTCGAGGAGTGTCCGAGGTATGGGGTAACCTCGGTTTGTGGACGGAGGAGGGACATGGAAGACGCCGTTTCCGTGCGTCCATCGTTTTGCCAAGAAAATGGCTCTCAAGATGATTCAAAAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGATGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATTGTGAAGGAGGAGGTTCACAAAGCGAAGGAGAGTTTGGAATGGGAATCAACGATGAAGAAGTGTTTCGCTCGCATGGACGAGGAGGTGCTAAAGTGGAGCCAGAACAACGAGACTCCGACTTGCAGGTGCGAGCTTCAAACTCCGCACTGCGACGCCGTGGGCTCCACCGCGGTCGTCGCCGTCGTCACGCCGGAGAAGATCATCGTCGCCAACTGCGGCGACTCACGCGCTGTGCTTTGCCGCAAAAACGTCGCCGTTCCACTCTCCGACGATCACAAGCCGGATCGACCCGACGAGTTGCTTCGGATCCAAGCCGCGGGTGGGCGCGTGATATACTGGGATGGGCCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAACCTTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAGCGGAGTGACGAGGATGAGTGTTTGATTCTAGGAAGCGATGGGCTTTGGGACACGGTGCAAAACGACACCGCATGCAAGGTGGTGCGGATGTGTCTGAAGCCGCCGTCGCCGCCGGCGTCTCCGGGGAGGGACTTGGCGGTGGACTGCTCCGACAAGGCGTGCTCCGACGCATCCATTCTGCTGACCAAATTAGCCTTGGTGAGGCATAGTTCGGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAAATCAATCAACGTCAACAACAAAAGGAATTAATTGA 1227 0.5542 MAGICCGVVGEPGETPSLIEPTSRPSARRSLDLLPLKYIAADVAIPAPESSRKRQKLDQCASPARECENAVQSSESKVVEDVSLPNCSKIPTLDSTNPTVVEECPRYGVTSVCGRRRDMEDAVSVRPSFCQENGSQDDSKGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHKAKESLEWESTMKKCFARMDEEVLKWSQNNETPTCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRKNVAVPLSDDHKPDRPDELLRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDEDECLILGSDGLWDTVQNDTACKVVRMCLKPPSPPASPGRDLAVDCSDKACSDASILLTKLALVRHSSDNVSVVVVDLRRNQSTSTTKGIN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02414 408 Pfam Protein phosphatase 2C 106 353 IPR001932 -
Pumo9g02414 408 Gene3D - 95 404 IPR036457 -
Pumo9g02414 408 SMART PP2C_4 96 393 IPR001932 -
Pumo9g02414 408 CDD PP2Cc 106 351 IPR001932 -
Pumo9g02414 408 ProSiteProfiles PPM-type phosphatase domain profile. 106 395 IPR001932 -
Pumo9g02414 408 FunFam Protein phosphatase 2C 37 101 402 - -
Pumo9g02414 408 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Pumo9g02414 408 PANTHER PROTEIN PHOSPHATASE 70 395 IPR015655 GO:0004722|GO:0006470
Pumo9g02414 408 SUPERFAMILY PP2C-like 99 396 IPR036457 -
Pumo9g02414 408 SMART PP2C_SIG_2 126 395 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02414 Pumo-Chr9 58277402 58279703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02414 83 399 PP2C-type Phosphatase Gene Family AT1G07430 59.767 1.74e-140 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02414 K14497 - gmx:100807302 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00183 1 2928500 2931157 Pumo9g02414 9 58277402 58279703 ECH
Pumo9g02414 9 58277402 58279703 Pumo9g02414 9 58277402 58279703 ECH
Pumo1g00183 1 2928500 2931157 Pumo9g02414 9 58277402 58279703 PCT