Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02408 ATGAAGGCATTGATTCTCGTTGGGGGGTTTGGAACAAGGCTGAGGCCATTGACACTCAGTTTCCCTAAGCCTCTTGTTGATTTTGCTAACAAGCCTATGATTCTGCATCAGATAGAGGCCCTTAAGGCCACTGGAGTTACTGAGGTGGTGCTAGCCATCAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGGATTTTGAAACAAAGCTCGGCATCAAGATCACATGTTCTCAGGAAACTGAACCAATGGGAACAGCAGGTCCCCTGGCTCTTGCCAGGGATAAGCTGATAGATGACTCTGGAGAACCCTTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTGAAAGAAATGATTGAATTCCATAAAAGCCATGGAGGAGAGGCTTCCATAATGGTAACAAAGGTTGACGAGCCATCAAAGTATGGTGTGGTTGTGATGGAGGAGAGCACAGGGCAAGTTGATAAATTTGTTGAAAAACCGAAATTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACCTGCTGAACCCCTCTGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCTGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTTTGGATGGACATTGGACAACCAAGGGACTATATTTCTGGCCTGAGGCTTTACCTGGACTCATTGAGGAAGAAGTCATCTTCTAAGTTGGCCAGTGGCTCTCAAATTGTAGGGAATGTCATTGTGGATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCTATTGGTCCTGGCTGCATTATTGAGCAAGGTGTTAGACTCAAAAGATGCACAGTAATGCGCGGAGTCCGGGTTAAGAAGCATGCTTGTGTATCCAGCAGTATTATTGGGTGGCATTCCACTGTTGGGCAATGGGCTCGAGTGGATAATATGACCATCCTTGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTGCCACACAAGGAGATCAAGTCAAATATTCTGAAGCCAGAGATTGTCATGTGA 1086 0.442 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKATGVTEVVLAINYQPEVMLNFLKDFETKLGIKITCSQETEPMGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEESTGQVDKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPRDYISGLRLYLDSLRKKSSSKLASGSQIVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEQGVRLKRCTVMRGVRVKKHACVSSSIIGWHSTVGQWARVDNMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02408 361 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Pumo9g02408 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 360 - -
Pumo9g02408 361 Gene3D Hexapeptide repeat proteins 229 357 - -
Pumo9g02408 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Pumo9g02408 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Pumo9g02408 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Pumo9g02408 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 228 IPR029044 -
Pumo9g02408 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02408 Pumo-Chr9 58186228 58189527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02408 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 23.871 9.21e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02408 K00966 - gmx:100777120 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02408 9 58186228 58189527 Pumo9g02408 9 58186228 58189527 ECH