Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02395 ATGATCTCTTCAGGCTTGTCGCATCTCCTCCAAATTCTTACCTGCATTCTACTTTTGACTCCATCATTTTCTGAAGATGATCGAAAGATATATATCGTCTACATGGGCGATTATCCGAAGGGCGTGGAATTCACAGAATCACTTCACACTAGTATGGTTCAAAGTGTTCTTGGCAGAAAATTTGCACCAGATGCTTTGCTGCACAGCTACAAGAGTTTTAATGGGTTTGTGGCGAGGCTAACAAATGAAGAAGCAGAAAGAATGAGAGGAATGGATAGTGTGGTCTCTGTTATACCAAACACAATCCATCAGCTCCAAACATCAAGGTCCTGGCACTTCCTTGGCTTCCCTGAAAATGTCACAAGAGCAAAAAGCGTAGAAAGTAACACAATCGTTGGAGTAATTGATAGTGGAATTTCGCCTAATTCTGATAGCTTTGCTGGCGGAGGATTTGGTCCACCACCACAAAAATGGAAGGGAACGTGCAATAACTTTACTTGCAATAACAAAATAGTTGGAGCAAAATATTCTCGCATTAGCCGTGTGTTTGCAAAAGAGGACATCATATCTCCTTTGGATACGAATGGTCACGGGACTCATTGTGCATCCGTTGCTGCTGGAAACCTAGTTAGGAATGCAAGTCTATTTGGGTATGGCTTAGGGACAGCCAGAGGAGGAGTTCCATCAGCACGAATTGCTGCATATAAAGTGTGTTGGACAAAGGGTTGTGACAGTGCTGACATCCTTGCAGCATTTGATGAAGCCATTAGAGACGGTGTTGACATTCTTTCTGTTTCAGTGGGACCTTCAAAAGTGAGACACGTCCAATATTTTGAAGATGTATATGCAATAGGAGCTTTCCATGCAATGAAGAGAGGCATATTAACTTCTAACTCTGCTGGTAATGATGGTCCAGACTCTTACTCAATATCAAATACTGCACCTTGGTTCGTTTCTGTAGCTGCCAGCACTACAGACAGAAGGTTTTTCACCAATGTCCAACTGGGCATTGGCCAGATCTTTCGGGGAGTTTCAATAAATACATTTAATCCAAGAAGTTATCCATTAATTTATGCTGGAAATGCACCCAACATAACAGGTGGATTTAATAGTTCCCAATCTAGGTATTGCCTTGAAAATTCTTTGGATCAAACTTTGGTGAGGGGAAAAATTGTTTTGTGTGAACACTTTCCTCCTAAAGGATACGTTTATGTTTCTGGGGCTGCTGGTGTTATAATTTCAAGTACATCTCCTTTAGTTCAGGCACGAATATATCCATTGCCATCAATTCACATTAGCCAAAATGATGGGACACTCGTACTTTCTTATATAAAGTCAACAAGTAATCCAACTGCTACCATACTTAAGAGTTACGAAGGCAAAGATTCATCAGCCCCTTACATTGCTCCATTCTCTTCTAGGGGTCCAAATAAAATCACTCCTGACATTCTTAAGCCTGATTTAGCTGCTCCAGGAGTTGACATTCTAGCTGCGTGGTCTCCAATTTCTCCTATTTCTGGTGTTAAAGGAGATACGAGATTCTCAAATTACAATATATTATCTGGAACATCAATGGCATGCCCTCATGTTACTGCAACAGCTGTCTACATCAAATCATTTCATCCTAACTGGTCTCCTGCAGTACTTAAATCCGCATTAATGACAACTGGTAATGGTCTCTTCGGTATCCACAAATATTGCAATCATTTTATGCCTTTTCTTGTCCCAATTAAAAAATGA 1740 0.4069 MISSGLSHLLQILTCILLLTPSFSEDDRKIYIVYMGDYPKGVEFTESLHTSMVQSVLGRKFAPDALLHSYKSFNGFVARLTNEEAERMRGMDSVVSVIPNTIHQLQTSRSWHFLGFPENVTRAKSVESNTIVGVIDSGISPNSDSFAGGGFGPPPQKWKGTCNNFTCNNKIVGAKYSRISRVFAKEDIISPLDTNGHGTHCASVAAGNLVRNASLFGYGLGTARGGVPSARIAAYKVCWTKGCDSADILAAFDEAIRDGVDILSVSVGPSKVRHVQYFEDVYAIGAFHAMKRGILTSNSAGNDGPDSYSISNTAPWFVSVAASTTDRRFFTNVQLGIGQIFRGVSINTFNPRSYPLIYAGNAPNITGGFNSSQSRYCLENSLDQTLVRGKIVLCEHFPPKGYVYVSGAAGVIISSTSPLVQARIYPLPSIHISQNDGTLVLSYIKSTSNPTATILKSYEGKDSSAPYIAPFSSRGPNKITPDILKPDLAAPGVDILAAWSPISPISGVKGDTRFSNYNILSGTSMACPHVTATAVYIKSFHPNWSPAVLKSALMTTGNGLFGIHKYCNHFMPFLVPIKK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02395 579 CDD Peptidases_S8_3 103 556 IPR034197 -
Pumo9g02395 579 Gene3D Peptidase S8/S53 domain 130 558 IPR036852 GO:0004252|GO:0006508
Pumo9g02395 579 SUPERFAMILY Subtilisin-like 105 561 IPR036852 GO:0004252|GO:0006508
Pumo9g02395 579 CDD PA_subtilisin_like 332 454 - -
Pumo9g02395 579 Pfam Subtilase family 128 557 IPR000209 GO:0006508|GO:0008236
Pumo9g02395 579 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 132 142 IPR023827 -
Pumo9g02395 579 Pfam Peptidase inhibitor I9 31 105 IPR010259 -
Pumo9g02395 579 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Pumo9g02395 579 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 557 IPR045051 -
Pumo9g02395 579 Gene3D - 326 461 - -
Pumo9g02395 579 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Pumo9g02395 579 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Pumo9g02395 579 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Pumo9g02395 579 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Pumo9g02395 579 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Pumo9g02395 579 ProSiteProfiles Serine proteases, subtilase domain profile. 110 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02395 Pumo-Chr9 57889214 57896890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02395 27 557 Subtilisin-like Serine Gene Family AT5G59100 49.724 6.19e-172 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02395 - - vum:124828449 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02395 9 57889214 57896890 Pumo1g00200 1 3163083 3166319 PCT