Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02393 ATGGCGAACAAAATGAGTGCAGTGTTTGTCATGGGCCTTGTCATCGTGAGCCTTATCTCAGTTACATCTGCCATTTCTGGAACTGCCACTTATTATAATGTTTACACACCATCTGCATGCTACGGGTACCAAGATCAGGGCACGATGATAGCTGCTGCAAGCGACGCAATATATGCGAATGGAGCTGCATGTGGTCAAATGTATAAGATCACATGCACAGGTCCTACAAACCAAGGTGTGCCTCAGCCATGCAAGGGTGGGAGTGTTACCGTCAAGATTGTGGATCGTTGCCCTTCCCCGGGTTGCCAAGCCACCATTGATCTCTCCCAAGAAGCTTTCTCTGCAATCGCTGACCTCAATGCTGGAAAAATTAATATTGACTACACCAAGGTGTGA 396 0.4747 MANKMSAVFVMGLVIVSLISVTSAISGTATYYNVYTPSACYGYQDQGTMIAAASDAIYANGAACGQMYKITCTGPTNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFSAIADLNAGKINIDYTKV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02393 131 CDD DPBB_EG45-like 25 129 - -
Pumo9g02393 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 129 IPR044206 GO:0009627|GO:0048046
Pumo9g02393 131 Gene3D - 23 131 IPR036908 -
Pumo9g02393 131 FunFam Barwin-related endoglucanase 24 130 - -
Pumo9g02393 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Pumo9g02393 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Pumo9g02393 131 SMART dpbb_1 50 128 IPR007112 -
Pumo9g02393 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02393 25 131 Expansin Gene Family AT4G01630 35.000 2.69e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02393 - - pop:7493352 221.09