Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02392 ATGTTAAAAGACTTTGCCGAAGATGATATCATATCTCCCAGAGATACGAATGGTCATGGATCACACTGTGCATCCACAGTTGCTGGAAACTCAGTTAACTCTGTAAGTCTATTTGGGTTGGCCTCAGGGACTGCCCGTGGAGGAGTTCCATCTGCCAGAATTGCTGTCTACAAAGTATTGTGGAGCAAAAATGGTAATGGTAACTTGGTCGACATCCTTTCAGCGTTTGATGAAGCTATTAATGATGGTGTTGACATCATTTCTGCTTCACTCGGGGCAGCTAGCGTAGAGAACGTTCCGTATTTCCAATCAATAATTGACATAGGAAGTTTCTATGCAATGAAAAGAGGGATATTAACGTCACATGCTGCCGGTAATTTGGGTCCGTCTCTTTACACTATGGCAAATTATGCACCATGGTTACTTTCTGTGGCTGCTAGCACTTTTGACAGAAAGATTGTTACCAAGGTGCAGTTAGGCAATCGGGCTGTTTATCAGGGGGTTTCATATAACACATTTGATCTTAAGAAAAAAATGTATCCTCTGATTTACGCTGGAGATGTACCTAACATCGCTGGTGGACATAACAGCTCCACATCCAGGTATTGCATAAAAGACTCTTTGGATGCACATTCAGTGAAGGGAAAGATTGTTCTGTGTGAAAGCATTCAGAGTTCTGCAGACGTGGGGTTTTTATCTGGGGCAGCTGGTGTTATATTTGGAATTAATGTTCATCAAGATTTGCCCGGAGCATATGCCCTGCCTGCTTTGCAGATTGCTCAGTGGGATCAAAGACTCATACATTCTTACATAACTTCAACCAGAAATGCAACAGCTACAATATTTAAGAGTGAAGAAATAAACGATGGGCTAATCCCATACGTAGGTGCGTTCTCATCGAGAGGTCCAAATCCTATCACACCAAATACCCTAAAGCCTGACATCGCTGCCCCGGGAGTTGAAGTTATAGCTGCATGGTCTCCACTGAACCCAATTTCAAGTGTCAAAGGTGACAAAAGAACTATACAGTATAATGTAATCTCTGGCACTTCAATGGCATGTCCTCATGTTACTGCAGCAGCTGTATATATCAAATCATTTCACCCCAATTGGTCTCCTGCTATGATTAAGTCTGCGTTGATGACCACAGGGAAGCCTGGAATGTCCCAAGACCTTGATGTTTGA 1185 0.4278 MLKDFAEDDIISPRDTNGHGSHCASTVAGNSVNSVSLFGLASGTARGGVPSARIAVYKVLWSKNGNGNLVDILSAFDEAINDGVDIISASLGAASVENVPYFQSIIDIGSFYAMKRGILTSHAAGNLGPSLYTMANYAPWLLSVAASTFDRKIVTKVQLGNRAVYQGVSYNTFDLKKKMYPLIYAGDVPNIAGGHNSSTSRYCIKDSLDAHSVKGKIVLCESIQSSADVGFLSGAAGVIFGINVHQDLPGAYALPALQIAQWDQRLIHSYITSTRNATATIFKSEEINDGLIPYVGAFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPLNPISSVKGDKRTIQYNVISGTSMACPHVTAAAVYIKSFHPNWSPAMIKSALMTTGKPGMSQDLDV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02392 394 SUPERFAMILY Subtilisin-like 12 386 IPR036852 GO:0004252|GO:0006508
Pumo9g02392 394 Pfam Subtilase family 11 384 IPR000209 GO:0006508|GO:0008236
Pumo9g02392 394 PRINTS Subtilisin serine protease family (S8) signature 348 364 IPR015500 -
Pumo9g02392 394 PRINTS Subtilisin serine protease family (S8) signature 15 28 IPR015500 -
Pumo9g02392 394 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 384 IPR045051 -
Pumo9g02392 394 Gene3D - 150 288 - -
Pumo9g02392 394 ProSiteProfiles Serine proteases, subtilase domain profile. 1 394 - -
Pumo9g02392 394 CDD PA_subtilisin_like 157 281 - -
Pumo9g02392 394 ProSitePatterns Serine proteases, subtilase family, serine active site. 349 359 IPR023828 -
Pumo9g02392 394 ProSitePatterns Serine proteases, subtilase family, histidine active site. 19 29 IPR022398 -
Pumo9g02392 394 Gene3D Peptidase S8/S53 domain 6 386 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02392 Pumo-Chr9 57811722 57817076 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02392 12 386 Subtilisin-like Serine Gene Family AT5G59190 48.011 1.53e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02392 - - gmx:100783380 634.795