Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02388 ATGGACAACGTTATCTCTGTTTTCCCAAACAAGAAGAATCGTCTTCACACAACAAGGTCGTGGAACTTCGTAGGGTTTCCTGAGAATGTGAAAAGAGCAACCACAGAGAGTGACATAATTGTGGGAGTATTAGACACGGGAATTTGGCCGGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCCTCCACCAAGCAGATGGAAAGGATCTTGTCATAACTTTACCTGCAACAACAAGATAATTGGTGCAAAGTACTTTAATCTGGAAAATGACTTTGCCAAAGATGATATCATATCTCCAAGAGATGCACAAGGTCACGGATCACACTGTGCATCCACAGTTGCTGGAAACTCCGTTAACTCTGCAAGTCTATTTGGGTTGGCCTCAGGGACTGCCCGTGGAGGAGTTCCATCTGCCCGAATTGCTGTGTACAAAGTGTGTTGGTTCAGCACAGGGTGTGGTGATGCTGACACCCTTGCAGCATTTGATGAAGCTATTACTGATGGTGTAGACATCATTTCTATTTCAACTGGATCCGGGAGAATATTACACATTCCGTATTTTTATGATTCAAATAATATAGGAAGTTTCCATGCAATGAAAAAACGGATATTAACGTCAAATTCTGGCAATAATTTGGGCCCTTCTCTTTCCTCAATGACAAATTATCCACCATGGTTACTTTCTGTTGCTGCTAGCACTTTTGACAGAAAGATTGTTACCAAGGTGAAATTGGGCAATGGGGCTATTTATGAGGGGGTTTCAATTAACACATTTGATCTTAAGAAAAAATTCTATCCACTGGTTTACGATGGAGATATACCTAACATTGCTGGTGGACATAACAGCTCTACATCCAGGTATTGCTTAGAGGACTCTTTGGATAAACATTCAGTGAAGGGAAAGATTGTTCTGTGTGAGCTTATTCAGAGTTCTGACGATGTGGGGATTTTATCTGGGGCAGTTGGTGTTATATTTGGACTTAATTACCCTCAAGATTTGCCCGGAACATATGCCCTGCCTGCTTTGCAGATTGCTCAGTGGGATCAAAGACTCATACATTCTTACATAACTTCAACCAGAAATGCAACAGCCACAATATTTAGGAGTGAAGAAATAAACAATGGGCTAATGCCTTTCATAGCTTCATTTTCATTAAGAGGTCCAAATCCAATCACACCAAATACCCTTAAGCCTGACATTGCTGCTCCCGGAGTTGAAGTTATAGCTGCATAG 1236 0.415 MDNVISVFPNKKNRLHTTRSWNFVGFPENVKRATTESDIIVGVLDTGIWPESESFSDKGFGPPPSRWKGSCHNFTCNNKIIGAKYFNLENDFAKDDIISPRDAQGHGSHCASTVAGNSVNSASLFGLASGTARGGVPSARIAVYKVCWFSTGCGDADTLAAFDEAITDGVDIISISTGSGRILHIPYFYDSNNIGSFHAMKKRILTSNSGNNLGPSLSSMTNYPPWLLSVAASTFDRKIVTKVKLGNGAIYEGVSINTFDLKKKFYPLVYDGDIPNIAGGHNSSTSRYCLEDSLDKHSVKGKIVLCELIQSSDDVGILSGAVGVIFGLNYPQDLPGTYALPALQIAQWDQRLIHSYITSTRNATATIFRSEEINNGLMPFIASFSLRGPNPITPNTLKPDIAAPGVEVIAA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02388 411 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 411 IPR045051 -
Pumo9g02388 411 Pfam Subtilase family 37 407 IPR000209 GO:0006508|GO:0008236
Pumo9g02388 411 CDD PA_subtilisin_like 243 367 - -
Pumo9g02388 411 ProSitePatterns Serine proteases, subtilase family, histidine active site. 106 116 IPR022398 -
Pumo9g02388 411 SUPERFAMILY Subtilisin-like 15 410 IPR036852 GO:0004252|GO:0006508
Pumo9g02388 411 Gene3D Peptidase S8/S53 domain 38 411 IPR036852 GO:0004252|GO:0006508
Pumo9g02388 411 CDD Peptidases_S8_3 15 234 IPR034197 -
Pumo9g02388 411 ProSiteProfiles Serine proteases, subtilase domain profile. 20 411 - -
Pumo9g02388 411 Gene3D - 236 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02388 Pumo-Chr9 57751917 57756852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02388 1 411 Subtilisin-like Serine Gene Family AT5G59190 48.434 9.74e-126 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02388 - - gmx:100815516 759.985