Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02380 ATGGCTCCTGGAGTCGACATTATAGCTAGTTGGTCTCCAATTTCCCCTCCTTCTGAATTTCATGGTGACAAGAGAAAATTACAGTTCAATATTATATCTGGAACATCAATGTCTTGCCCCCACGTGTCAGGTGCAGCAGGGTATGTCAAATCATTTCATCCTACTTGGTCTCCTGCTGCTATACGCTCAGCTCTAATGACAACAGAACAATAA 213 0.4272 MAPGVDIIASWSPISPPSEFHGDKRKLQFNIISGTSMSCPHVSGAAGYVKSFHPTWSPAAIRSALMTTEQ 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02380 70 SUPERFAMILY Subtilisin-like 1 68 IPR036852 GO:0004252|GO:0006508
Pumo9g02380 70 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 69 IPR045051 -
Pumo9g02380 70 Gene3D Peptidase S8/S53 domain 1 68 IPR036852 GO:0004252|GO:0006508
Pumo9g02380 70 ProSiteProfiles Serine proteases, subtilase domain profile. 1 70 - -
Pumo9g02380 70 ProSitePatterns Serine proteases, subtilase family, serine active site. 34 44 IPR023828 -
Pumo9g02380 70 Pfam Subtilase family 1 69 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02380 Pumo-Chr9 57531998 57533446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02380 2 68 Subtilisin-like Serine Gene Family AT5G58830 59.701 1.15e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02380 - - gmx:100784447 130.568