Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02379 ATGCAGGAAAGCAAGAATTTATTGCATCACTGTGAAGTGGTCATCAAAAAAGGTCAAACAGACAAGCATGTAGAGCTCCCCTGCTGTAGTGCATCTTGGTGTGCTACTGAGGTGGTTATCTCTTCAGTGGAGATTGGATATAAGCTAGATAACCTTCGCTCAGAGAATGTGGCATTCAACCACTTTGGTCAGGGGGCTGATCCAGAGAGAATGCCCAGATGCAGATGGGGTTTTGTCCATGTGATAAACAATGACTACACGCAGTGGCTGTTGTATGCAATGGTGGCAGTTCAGGGCCAACGATTGAGCCAGGGAAAGTAA 321 0.4642 MQESKNLLHHCEVVIKKGQTDKHVELPCCSASWCATEVVISSVEIGYKLDNLRSENVAFNHFGQGADPERMPRCRWGFVHVINNDYTQWLLYAMVAVQGQRLSQGK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02379 106 PANTHER PECTATE LYASE 18-RELATED 56 104 IPR045032 GO:0030570
Pumo9g02379 106 SUPERFAMILY Pectin lyase-like 23 95 IPR011050 -
Pumo9g02379 106 Gene3D - 31 105 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02379 Pumo-Chr9 57519222 57522552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02379 57 105 Polysaccharide Lyase AT3G01270 64.000 5.43e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02379 K01728 - csv:101206497 78.9517