Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02378 ATGCAGGGAGTTTCAATAAATACATTTGATCCAAGAAGTTATCCATTAATTTATGCTGGAGATGCACCCAACATAAGAGGTGGATTTGATAGTTCTCAATCTAGGTATTGCCTTGAAAATTCTTTGGATGAAACTTTGGTGAGGGGAAAAATTGTTTTATGTGAAGACTTTCCTCTTAAAGGATATGTTTATGTTTCTGGGGCTGCTGGTGTTATAATTTCAAATACAAATCCTTTAGTTGAGGCACAAATATATCCATTGCCAGCAATTCAAATTAGCCTAAATGACGGGGGACTCGTATATTCTTATTTAAAGTCAACAAGTTATCCAACTGCTACCATATCTAAGAGTTACGAAGGCAAAGATTCATTAGCCCCTTACATTGCTCCATTCTCATCTAGAGGTCCAAATAAAATCACTCCTGACATTCTTAAGCCTGATTTAGCTGCTCCAGGAGTTGACATTCTAGCTGCATGGTCTCTGATTTCTCCTATTTCTGGTGTTAAAGGAGATACGAGATTTTCATATTACAATATAATATCTGGAACATCAATGGCATGCCCTCATGTTACTGCAGCAGCTGTCTACATCAAATCATTTCATCCTAACTGGTCTCCTGCAGTACTTAAATCTGCATTAATGACAACTGCTACCCCTATGCGTTCTGCACTTGATGGACATGCTGAATTTGCTTATGGTGCGGGGCAAATCAATCCTATCAAGGCAATAAATCCTGGATTAGTTTATGATGCTAATGAAATTGATTATGTCAAGTTTCTGTGTGGACAAGGTTATACTACAAGTCTGTTGCGACGAATTACAGGAGATAACAGCAGTTGTACGCAAGCAAATATGGGGTCTGTTTGGGACCTTAATCTCCCATCTTTTGCTCTATCTACAGCTTTCTCAAGGTATACTAGTGTCACTTTTAGTAGAACTGTTACAAATGTTGGATCAGCTACATCCACATATAGAGCCACAATAACTCCATATCCATCTTCGTTAAACATCCAAGTAGTGCCAAATGTTCTGGTCTTCTCATCTTTGGGTCAGACAAAGACGTTCACTCTTAAGATTGAAGGAACCATTAATGCAAATCCAGTTTCTTCATCTTTGATTTGGGATGATGGTACTTTTCAAAACAAGGAACTCCCTCTCCTTCTCAGCTCCTCCACTCACTCTCAGCAACAACAATTCACTTTCATTTTGGCAAATACAGACACAGACACAAATGCTGCTGCTAAAGTGATAAGAGTGTTGGTTGTATCTTCCATCTCAGATTGTGCTGTGGATACCATTTTGTGA 1305 0.3862 MQGVSINTFDPRSYPLIYAGDAPNIRGGFDSSQSRYCLENSLDETLVRGKIVLCEDFPLKGYVYVSGAAGVIISNTNPLVEAQIYPLPAIQISLNDGGLVYSYLKSTSYPTATISKSYEGKDSLAPYIAPFSSRGPNKITPDILKPDLAAPGVDILAAWSLISPISGVKGDTRFSYYNIISGTSMACPHVTAAAVYIKSFHPNWSPAVLKSALMTTATPMRSALDGHAEFAYGAGQINPIKAINPGLVYDANEIDYVKFLCGQGYTTSLLRRITGDNSSCTQANMGSVWDLNLPSFALSTAFSRYTSVTFSRTVTNVGSATSTYRATITPYPSSLNIQVVPNVLVFSSLGQTKTFTLKIEGTINANPVSSSLIWDDGTFQNKELPLLLSSSTHSQQQQFTFILANTDTDTNAAAKVIRVLVVSSISDCAVDTIL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02378 434 Pfam Subtilase family 125 235 IPR000209 GO:0006508|GO:0008236
Pumo9g02378 434 SUPERFAMILY Subtilisin-like 125 244 IPR036852 GO:0004252|GO:0006508
Pumo9g02378 434 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 375 IPR045051 -
Pumo9g02378 434 Pfam Fibronectin type-III domain 290 378 IPR041469 -
Pumo9g02378 434 Gene3D - 260 392 - -
Pumo9g02378 434 Gene3D - 2 121 - -
Pumo9g02378 434 ProSiteProfiles Serine proteases, subtilase domain profile. 1 243 - -
Pumo9g02378 434 CDD PA_subtilisin_like 3 114 - -
Pumo9g02378 434 Gene3D Peptidase S8/S53 domain 122 256 IPR036852 GO:0004252|GO:0006508
Pumo9g02378 434 ProSitePatterns Serine proteases, subtilase family, serine active site. 182 192 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02378 Pumo-Chr9 57473780 57477349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02378 3 388 Subtilisin-like Serine Gene Family AT5G59100 43.939 1.46e-95 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02378 - - gmx:100783918 599.742