Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02360 ATGGTTAAAGGACGCCAAGGAGAACGTGTCAGACTTCACGTCAGGGGTTCAATTCTCGGATACAAGAGGTCCAAGTCAAATCAATATCCAAATACCTCTTTAATCCAGATTGAGAATGTAAACACCAAGGAAGAAGTTGCATGGTACTGCGGGAAGCGCATGGCTTACATTTACAAAGCCAAGGTAAAGAAGAACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTCACCAGGCCTCATGGTAACAGTGGTATAGTTCGTGCTAAGTTCAAGTCCAATCTGCCACCCAGATCAATGGTAATTTTTCGGACTCAGAATTGGTTTTTGTTTTTGGCATTTTTGGTGGCTTCTGACTGTTGA 360 0.4389 MVKGRQGERVRLHVRGSILGYKRSKSNQYPNTSLIQIENVNTKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMVIFRTQNWFLFLAFLVASDC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02360 119 Gene3D translation elongation factor selb, chain A, domain 4 6 102 IPR038661 -
Pumo9g02360 119 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pumo9g02360 119 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Pumo9g02360 119 Pfam Ribosomal protein L35Ae 12 99 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pumo9g02360 119 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pumo9g02360 119 FunFam 60S ribosomal protein L35a 7 105 - -
Pumo9g02360 119 SUPERFAMILY Translation proteins 12 99 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02360 Pumo-Chr9 57010921 57013440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02360 1 99 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.879 1.65e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02360 K02917 - gmx:100305997 204.912