Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02349 ATGCCTTCTCCTGCACCCACCTTGCTCTCCAAATGCACCGTCTTCCCAGACCATAAGTCCACTCTCGGAAACCTCAAACTCTCCGTTTCGGACCTCCCCATGTTGTCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCCAATCTCCCACTCCACTCTTTAATCCCGCTTCTTAAATCCGCACTCTCTCGAACTCTCTCCCTCTTCCCCCCTCTCGCCGGCCGTTTAATCACCGATTCCGACGGTTACGTCTACATCGCCTGCAACGACGCCGGCGTCGATTTCATCCACGCCAATGCCACCGGCCTCCGCATCTATGACTTACTTTCCCCACTCGATGTTCCGGAATCTTTCAAGGAATTCTTCGCCTTCGATAGGAAAGTCAGCTACACTGGTCACTTCTCCCCAATTCTCGCCGTTCAGGTCACCGAACTCGCCGACGGCCTCTTCATCGGCTGCGCCGTCAATCACGCCGTCACCGACTGGCACCTCCTTCTGGAATTTCTTCAACACCTTTGCTCAGTTCAGCAGAGGAGCCAGCAGCTGCATCCGCAATATACCGGACTTCCGCCGCGAGTCCGTTATCATCTCCGACGCCGTTCTCCGGTTACCGGAGGGCTGGTCCTCAGGTTACGTTCGACGCCAACGCGCCTCTGCGCGAGAGAATCTTCAGCTTCAGCCGCGAAGCCATTCAGAAGCTCAAAGCCAAAGCCAACAACCGCCGCTGGTCCGGAAAATAACAACATCAACGCCGCCGAGTTTATGTGGAAGCAAAGCCACGATACTCAACTAAAGGAGAACAAGGCCACGACAATTCTCGAGAACTGGTTCAAGGTGAATTCGAATTCGATTTCGAAATCGCAAACGGTTACCGAAACGGTGGAGATTTCGTCGTTTCAATCGGTGTGCGCGCTTCTGTGGCGCGGGGTGACGCGGGCGAGGAAATTGCCTTCGTCCAAAACGACGACGTTCAGAATGGCGGTTAACTGTCGTCACCGGATGGAGCCGAAATTGGAACCGTACTACTTCGGGAACGCGATACAGAGCGTGCCTACTTACGCTTCCGCCGGGTGA 1080 0.5491 MPSPAPTLLSKCTVFPDHKSTLGNLKLSVSDLPMLSCHYIQKGCLFTQPNLPLHSLIPLLKSALSRTLSLFPPLAGRLITDSDGYVYIACNDAGVDFIHANATGLRIYDLLSPLDVPESFKEFFAFDRKVSYTGHFSPILAVQVTELADGLFIGCAVNHAVTDWHLLLEFLQHLCSVQQRSQQLHPQYTGLPPRVRYHLRRRSPVTGGLVLRLRSTPTRLCARESSASAAKPFRSSKPKPTTAAGPENNNINAAEFMWKQSHDTQLKENKATTILENWFKVNSNSISKSQTVTETVEISSFQSVCALLWRGVTRARKLPSSKTTTFRMAVNCRHRMEPKLEPYYFGNAIQSVPTYASAG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02349 359 Gene3D - 7 205 IPR023213 -
Pumo9g02349 359 Gene3D - 258 359 IPR023213 -
Pumo9g02349 359 Pfam Transferase family 8 182 - -
Pumo9g02349 359 Pfam Transferase family 252 358 - -
Pumo9g02349 359 MobiDBLite consensus disorder prediction 223 248 - -
Pumo9g02349 359 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02349 Pumo-Chr9 56809640 56810719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02349 59 359 Monolignol Biosynthesis Gene Families AT5G48930 29.508 1.84e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02349 - - gmx:100779616 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02349 9 56809640 56810719 Pumo9g02349 9 56809640 56810719 ECH
Pumo1g00233 1 3600824 3601042 Pumo9g02349 9 56809640 56810719 PCT