Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02346 ATGGACGAGGGCATGTCAGGCTTTTGCATTAGATCATCAGGAAGTGTCCGTGGCAAAAGTGGCAGCACTACTACCACTGGCACCAAGTGTGGGCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTAACTGAACTGTTCAGGTCAGGGCTCCGCACCCCAAGCACTGACCAGATTCAAAAGATTTCTACTCAGCTTAGCTTTTATGGCAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAGAAGCGCCGTAAGGTCTCCTTTGATGACAAGGATCTCATTCGTAGACAACAAAACTCTATCAATGCACCTTCTACACAAAGTCTTGCTGAGATGTATCAAGTTTCTGAGCCAGATAGGGTTATTGAGACTCTTCAACTCTTTCCCTTAAACTCCTTTGGTGAATCTGAACCAGAGAAGCTGAGGTTGCATGCAAGTGAATGTAGGGATAATAATACAATGTTTTCATACACGATGGGTGAACAAATGGAGCACCCACCATTAGACTTGCGCTTGAGCTTTCTGTAA 555 0.445 MDEGMSGFCIRSSGSVRGKSGSTTTTGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDKDLIRRQQNSINAPSTQSLAEMYQVSEPDRVIETLQLFPLNSFGESEPEKLRLHASECRDNNTMFSYTMGEQMEHPPLDLRLSFL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02346 184 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Pumo9g02346 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 114 IPR044555 GO:0003700|GO:0099402
Pumo9g02346 184 SMART HOX_1 28 95 IPR001356 GO:0003677
Pumo9g02346 184 MobiDBLite consensus disorder prediction 12 31 - -
Pumo9g02346 184 CDD homeodomain 32 92 IPR001356 GO:0003677
Pumo9g02346 184 Gene3D - 29 97 - -
Pumo9g02346 184 MobiDBLite consensus disorder prediction 13 31 - -
Pumo9g02346 184 FunFam WUSCHEL-related homeobox 11 29 97 - -
Pumo9g02346 184 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Pumo9g02346 184 SUPERFAMILY Homeodomain-like 23 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02346 Pumo-Chr9 56796655 56797545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02346 13 184 Wox Gene Family AT3G11260 55.497 2.07e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo9g02346 Homeodomain 6.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02346 - - gmx:100820304 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02346 9 56796655 56797545 Pumo9g02346 9 56796655 56797545 ECH