Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02339 ATGGCGGGGAAAGGGGCAAAGGCAGCTTACGATGCAAAGATGCTGAAGCTTCTGAGAGAGTACAGTCAGGTGCTGGTGGTTTCATCGGACAATGTGGGTTGCAACCAGCTTCAGGGCATACGGAGGGGACTTAATACTGATTTAGCGGTGGTGATGGGAAAGAACTCCATGATGAAACGCTCTATCATCTTGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGGATGATGGAAAATGAAAATGATTTTGATCAGGGTTTCAATTTGGGATATAAGCGTCACTACCTTCACAAATTCAGAACCTTTTACTTGATCAGTATTGGCTCAAGGCAAATGTTAATGAGTGCCATGAGGGCACTAGCTAAGGAAGTAAAAGAGAAAAATGTTTTATTGGATTGTGCAAAAATGCGCTTTCCTACTATTTTTAAACGTGTTCGCATATGA 468 0.4359 MAGKGAKAAYDAKMLKLLREYSQVLVVSSDNVGCNQLQGIRRGLNTDLAVVMGKNSMMKRSIILDAQKTGNKAFLNLVPLLVGMMENENDFDQGFNLGYKRHYLHKFRTFYLISIGSRQMLMSAMRALAKEVKEKNVLLDCAKMRFPTIFKRVRI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02339 155 Gene3D - 3 85 IPR043141 -
Pumo9g02339 155 Pfam Ribosomal protein L10 6 68 IPR001790 -
Pumo9g02339 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 6 83 - -
Pumo9g02339 155 SUPERFAMILY Ribosomal protein L10-like 6 83 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02339 Pumo-Chr9 56706829 56709130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02339 1 93 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 54.000 2.48e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02339 K02941 - nnu:104590633 111.309