Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02331 ATGGTAGATAATTACCTAGAGGGAACTATTCCAGATTCAATTGGAAAGCTTAAAAATCTAGTAAGATTCGCCCTGGAAGGAAACAAATTGTCTGGTAATATTCCGACAGCCATTGGCAATCTTACTATGTTGTCGGAACTTTATCTGCACACCAATAATCTCGAAGGAAGCATTCCATTAACCCTCAAATACTGCACCCGCATGCAGTCATTTGGTGTTTCTGACAACAACTTGAGTGGTGACATCCCTAGTCAAACATTTAGCAATCTAGAAGGATTGATAAATCTTGACTTATCCAACAACTCTTTCACTGGTTCCATTCCTTTAGAGTTCGGAAACTTGAAGCACCTTTCCATATTATATCTATACGAAAACAAATTGTCAGGTGAAATTCCCCCCGAACTCGGCTCTTGTTCTGCGTTAACAGAGCTCAAGCTAGGGAAAAACTTCTTCCGTGGAAGCATACCTTCATTCTTGGGCTCTTTAGGATCCCTCGAAATCATAGACCTTTCTAACAACAACTTCTCAAGCACAATCCCTGGTGAACTACAAAATCTGAGTTATTTGAATACTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCTATAGGAGGCATCTTTAATAACGTCACAGAAATTTCACTTATTGGAAATATGGATCTCTGTGGGGGGATACCTCAACTGAAGTTCCCTGCGTGCTCTAAGTTTCCCTCAAAGAAACACAAGAAACTCATCAGCATCATTGTAATTGGAGTTGGAGGGGCTTTGGCCAGTTCCATAATATTTATCAGCATCTATTTGTTCAGGAAAAAGCCCAAAACATTTTCTTCATCACGGTCTCTGCAAAATATGTACTTGAAGATTTCTTATGGAGAGCTGCATGAAGCAACAAATGGATTTTCGTCATCCAATTTAGTAGGTACTGGAAGCTTTGGTTCTGTGTATAAAGGATCTCTTCTCCTTTTTGAAAGACTTGTTGCTGTAAAGGTGTTGAATCTTGAAACTTGTGGGGCATCAAAGAGTTTCACAGCTGAATGCAAGGCTCTAGGAATGATCAAGCACCATAATGTTCTCAACATCCTGACTTTTTGTTCGAGTGTTGATTATAATGGGGATGATTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGGAGTCTAGATTGTTTGCTGCACAGCAACGAAGAGCTCGAGTCTGGAAATTTCAATCTCAACCTTCAACTTATGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATCATGGTTCCGAGCAAGCTGTAGTTCACTGTGATATTAAGCCAAGCAACATTCTTCTTGACGATGACTTTGTTGCCCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTAATGTGGTCACGGGACATTCCAGCAGAGATCAGATTAGTTCGGCTGCAATTAAAGGAACCATTGGATATGTTCCCCCAGAGTACGGAGCAGGTGTCGGAGTATCACCAAAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTGACAGGAATGAGACCAACAGATAACATGTTTGGTGAGGGTCTAAGCCTACACAAATTCTGTCAGATGGCAACTGTAGAAGGAATCACTAAGATAGTAGATTCACGTTTGCTTGTGCCAATTAATAAAGAAGGAACAAGGGTCATGGAAACCAACATCAGGGAGTGTCTGGTGGCCTTTGCTAGGATTGGAGTTGCATGTTCTGCAGAATTGCCTGCTCAGCGAATGGGCATTAAAGATGTGATAATGGAGTTGCAAGCAATCAAACAGAAGCTGCCCCAATAG 1821 0.4091 MVDNYLEGTIPDSIGKLKNLVRFALEGNKLSGNIPTAIGNLTMLSELYLHTNNLEGSIPLTLKYCTRMQSFGVSDNNLSGDIPSQTFSNLEGLINLDLSNNSFTGSIPLEFGNLKHLSILYLYENKLSGEIPPELGSCSALTELKLGKNFFRGSIPSFLGSLGSLEIIDLSNNNFSSTIPGELQNLSYLNTLNLSFNHLYGEVPIGGIFNNVTEISLIGNMDLCGGIPQLKFPACSKFPSKKHKKLISIIVIGVGGALASSIIFISIYLFRKKPKTFSSSRSLQNMYLKISYGELHEATNGFSSSNLVGTGSFGSVYKGSLLLFERLVAVKVLNLETCGASKSFTAECKALGMIKHHNVLNILTFCSSVDYNGDDFKAIVFEFMPNGSLDCLLHSNEELESGNFNLNLQLMLNIALDVANALDYLHHGSEQAVVHCDIKPSNILLDDDFVAHLGDFGLARLLNVVTGHSSRDQISSAAIKGTIGYVPPEYGAGVGVSPKGDIYSYGILLLEMLTGMRPTDNMFGEGLSLHKFCQMATVEGITKIVDSRLLVPINKEGTRVMETNIRECLVAFARIGVACSAELPAQRMGIKDVIMELQAIKQKLPQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02331 606 Gene3D Ribonuclease Inhibitor 1 244 IPR032675 -
Pumo9g02331 606 SUPERFAMILY Protein kinase-like (PK-like) 276 597 IPR011009 -
Pumo9g02331 606 ProSitePatterns Protein kinases ATP-binding region signature. 308 331 IPR017441 GO:0005524
Pumo9g02331 606 SUPERFAMILY L domain-like 3 225 - -
Pumo9g02331 606 Gene3D Phosphorylase Kinase; domain 1 265 383 - -
Pumo9g02331 606 Pfam Leucine rich repeat 69 127 IPR001611 GO:0005515
Pumo9g02331 606 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Pumo9g02331 606 SMART serkin_6 302 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02331 606 Pfam Protein kinase domain 304 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02331 606 Gene3D Transferase(Phosphotransferase) domain 1 384 605 - -
Pumo9g02331 606 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 85 - -
Pumo9g02331 606 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 108 232 - -
Pumo9g02331 606 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 384 606 - -
Pumo9g02331 606 FunFam LRR receptor-like serine/threonine-protein kinase EFR 273 383 - -
Pumo9g02331 606 PANTHER OS04G0122200 PROTEIN 3 603 - -
Pumo9g02331 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Pumo9g02331 606 SMART LRR_typ_2 90 113 IPR003591 -
Pumo9g02331 606 SMART LRR_typ_2 114 138 IPR003591 -
Pumo9g02331 606 SMART LRR_typ_2 41 64 IPR003591 -
Pumo9g02331 606 SMART LRR_typ_2 186 211 IPR003591 -
Pumo9g02331 606 SMART LRR_typ_2 162 185 IPR003591 -
Pumo9g02331 606 ProSiteProfiles Protein kinase domain profile. 302 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02331 Pumo-Chr9 56636733 56638958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02331 3 603 Receptor kinase-like Gene Family AT3G47570 45.854 4.55e-168 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pumo9g02331 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02331 - - gmx:100776429 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02331 9 56636733 56638958 Pumo9g02331 9 56636733 56638958 ECH