Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo9g02325 | ATGGCATCTCTCATCACACCACTATTCCTTCTCATCATCTCCGCCGTCCTCCTCCTCCTCTTCCTCCACCGCCGATCCCGCTACCGCCGCCTCCGCCTGCCGCCGGGGACCCTCGGCCTACCCTTTGTCGGTGAAACCTTACAACTCATATCAGCTTATAAAAGCGACAACCCAGAACCTTTTATTGACCAGCGCGTGAACCGCTACGGTCCAATCTTCACCACCCACGTCTTCGGCGAACCCACCGTGTTCTCTGCCGACCCGGAAACGAACCGGTTCATTTTACTCAACGAAGGGAAGCTCTTCGAATGCAGCTACCCCGGTTCGATATCGAACCTCCTCGGGAAACACTCTCTGCTCCTGATGAAGGGTTCTCTCCACAAGAGAATGCACTCCCTCACCATGAGCTTCGCCAACTCCTCCATCATCAAAGACCATTTACTCGTCGACATAGACCGGCTCATCCGGCTCAACTTGGATTCCTGGACCGACCGGGTCTTTCTCATGGAAGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGCTTATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTAAGGAAAGAGTACGTTCTTGTGATCGAAGGATTTTTCACACTCCCCTTGCCTCTCTTCTCAACTACCTACCGTAGAGCCATCAAGGCTAGAACGAAGGTGGCAGAGGCATTAACGTTGATAGTGAGGCAGAGAAGAAAAGAGAGCGAAGCGGGGGAGAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCGACCACTTTTCCGACGAGCAAATAGTGGATTTTATGTTGGCTTTGCTCGTCGCCGGCTATGAAACCACCTCTACCATTATGACTCTTGCCGTCAAGTTCCTCACCGAGACTCCTCTAGCATTAGCACAACTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAGAGTTACTCAGAAGCACCACTGGAGTGGACAGATTATAAGTCAATGACATTTACTCAATGCGTTGTGAACGAGACTTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGGAGAGCAATGACAGACATCAACATAAAAGGTTACACTATTCCAAAGGGATGGAAGGTCTTTGCTTCATTTCGTGCTGTACATCTAAACCCTGACCATTTCAAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAGCAACTAGCCCTGTGAATGTATATACCCCGTTTGGAGGAGGGCCACGGCTGTGCCCTGGCTTCGAGCTCGCCAGAGTGGTGCTGTCTGTCTTCCTTCACCGCATTGTCACCCGCTATAGTTGGTTTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGAGGAGTCCAGACTAAGTAAATCGCCATGA | 1440 | 0.4979 | MASLITPLFLLIISAVLLLLFLHRRSRYRRLRLPPGTLGLPFVGETLQLISAYKSDNPEPFIDQRVNRYGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWTDRVFLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVRQRRKESEAGEKKNDMLGALLASGDHFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSYSEAPLEWTDYKSMTFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQSNSEATSPVNVYTPFGGGPRLCPGFELARVVLSVFLHRIVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREESRLSKSP | 479 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 335 | 353 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 410 | 420 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 288 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 268 | 285 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 375 | 399 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | E-class P450 group I signature | 420 | 443 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | SUPERFAMILY | Cytochrome P450 | 25 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | CDD | CYP90-like | 65 | 469 | - | - | |
| Pumo9g02325 | 479 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 413 | 422 | IPR017972 | GO:0005506|GO:0016705 | |
| Pumo9g02325 | 479 | Gene3D | Cytochrome P450 | 23 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | P450 superfamily signature | 279 | 296 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | P450 superfamily signature | 336 | 347 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | P450 superfamily signature | 411 | 420 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PRINTS | P450 superfamily signature | 420 | 431 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | PANTHER | CYTOCHROME P450 26 | 29 | 444 | - | - | |
| Pumo9g02325 | 479 | FunFam | Cytochrome P450 90A1 | 23 | 470 | - | - | |
| Pumo9g02325 | 479 | Pfam | Cytochrome P450 | 210 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pumo9g02325 | 479 | Pfam | Cytochrome P450 | 34 | 135 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo9g02325 | Pumo-Chr9 | 56504670 | 56511136 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo9g02325 | 122 | 471 | Cytochrome P450 | AT5G05690 | 82.051 | 0.0 | 590 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo9g02325 | K09588 | - | gmx:100775886 | 864.374 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo9g02325 | 9 | 56504670 | 56511136 | Pumo9g02325 | 9 | 56504670 | 56511136 | ECH | |
| Pumo1g00248 | 1 | 3810194 | 3815851 | Pumo9g02325 | 9 | 56504670 | 56511136 | PCT |