Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02320 ATGAAGAAGAATAAATCACCCTTCTCCGTCGCCACCTTCACTCTCGTCGCCGCCACCCTCTTAATCCTCTATTCACTACCCCTCTCCCATGCCCTCGGTTCCGCCGCCACCCTCGCCGTCACCTCCGCCGCCGTCTGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCGTGCTACCGCGGCGGCGAAGTCGTCGCCGTCGCCCCCAACGTCTCGTTCTCGGCGATCTCCGGCGGCCGGAGCTACTTCTGCGGCCTCCGGTCCGGCAACTACAGCCTCCTCTGCTGGGACACCCTCTCCAGCTTCCAAAGCAAGAGGCTTTACAACAATGGCACTGTTCTATTCGAGAATCTCGCCCTCGGGGACTCCCAGGTCTGCGCCACCGTGGTCGGCGCCGGAACGGCGTCGTGTTGGAGAACCAACGACGCGTTCGAATTGCCATCTGGGTCGGACCGTTTCGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAATTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGGGTTGGGTCTGTGGCGAGAAGAATGGAGAGTGAGTTCGGGAACATGTCTATGGCGAGTCTCGTGGCTGGTGAGTCACATGTTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGCAACGATTTTGGTCAAATTGATGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTTTGGCGCTTGGGGCTGAGCATACTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGATGATGTTACAACAGGTGTTTCTTTTGAGGTTATTGTTTCTGGGTCCAATTTTACTTGTGGATTGACGACTAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGGCTAATGGTTCAGGTTATGAGATTCCCTTGCCTCCTGTTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGGATGTATCCTCAATCTGAGTCTTTGTGTTCTGGATATGGTAACATTTGTAAGCCAAAGCCTTGTTGGCCTGAAATGCTGGTGCCGGCGCCACCTGCGGTGGTGCCGGCATCACCACCGGGGCCTTCGGCTTCTCGGTCGAAGGCCTTGACTAAGGGGTTATTGGCATTTGCCATTGTTGGATGCCTGGGAGGTGTTGCTGGGATATGCACTGTGATTTATTGTTTGTGGACTGGGGTTTGTTTTGGGAAGAAGAAAGTTCACAATTCTGTGCAGCCAACAATCACTAGAGGTGGCAGTGTAAATGGTGCGGGTGGTTCTAACAATAGTATTAGTCCTCCTTCGAGATCATCCACCATTAGGCGTCAAGGGTCACGGATAATGAGGCGCCAAAGGAGTGGAACCTCATCCACAAAGCATCCTGAGAGGGCTGAGGAGTTCACTTTGGCTGAGCTTGTTGCAGCCACGGATAATTTCTCCCTTGAGAATAAGATTGGTGCTGGAAGCTTTGGTGTTGTTTATAGAGGCAAACTCGCGGATGGTCGTGAGGTGGCAATCAAAAGGGGTGAAACTGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCGGAATTGGCCTTCTTGTCCCGGTTACACCACAAGCACTTGGTTAGGCTGGTGGGATTCTGTGAAGAGAAAGATGAGAGGCTGTTGGTGTATGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAAAACAATGTGGACAAGAGTAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCTCTGGATGCTTCGCGAGGAATTGAGTATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAACATTCTCATTGACGAGACTTGGACGGCGAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCTAACCATGACTACCGGCCAATGAAGGCAGCAGGAACAGTTGGATACATTGATCCTGAATATTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTGCTGTTAGAACTATTAACAGGAAAGAGAGCTATATTCAAGAATGATGAAAATGGAGGCACCCCAGTGAGTGTGGTAGACTTTGCAGTGCCAGTAATTATGGTGGGAGAATTGGCAAAAATTTTGGACCCCAGGGTTGAACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTAGTGGGATATACTGCTATGCATTGTGTAAATTTGGAAGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCTTTGGCTCTTTGTGACAGTAGTCATGGCAGCATTTCCAGTGGTACAATCTCCATTGTATCTGACTGA 2388 0.4941 MKKNKSPFSVATFTLVAATLLILYSLPLSHALGSAATLAVTSAAVCGVVASEPTRRIACYRGGEVVAVAPNVSFSAISGGRSYFCGLRSGNYSLLCWDTLSSFQSKRLYNNGTVLFENLALGDSQVCATVVGAGTASCWRTNDAFELPSGSDRFDSISSGSGFSCGILKGSDRVRCWGVGSVARRMESEFGNMSMASLVAGESHVCGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGAEHTCAIRRSNGSVVCWGGRGLFEDDVTTGVSFEVIVSGSNFTCGLTTNNFSVICWGPGWANGSGYEIPLPPVLPGPCVQSSCSECGMYPQSESLCSGYGNICKPKPCWPEMLVPAPPAVVPASPPGPSASRSKALTKGLLAFAIVGCLGGVAGICTVIYCLWTGVCFGKKKVHNSVQPTITRGGSVNGAGGSNNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTLAELVAATDNFSLENKIGAGSFGVVYRGKLADGREVAIKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDETWTARVSDFGLSLMSPESNHDYRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSVVDFAVPVIMVGELAKILDPRVEPPELNETEAVELVGYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIVSD 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02320 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 192 781 IPR044815 GO:0004674
Pumo9g02320 795 SUPERFAMILY Protein kinase-like (PK-like) 464 771 IPR011009 -
Pumo9g02320 795 MobiDBLite consensus disorder prediction 422 470 - -
Pumo9g02320 795 ProSiteProfiles Protein kinase domain profile. 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02320 795 SUPERFAMILY RCC1/BLIP-II 66 300 IPR009091 -
Pumo9g02320 795 Gene3D - 54 303 IPR009091 -
Pumo9g02320 795 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Pumo9g02320 795 SMART serkin_6 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02320 795 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Pumo9g02320 795 Pfam Regulator of chromosome condensation (RCC1) repeat 196 224 - -
Pumo9g02320 795 FunFam Serine/threonine-protein kinase-like protein CCR4 567 788 - -
Pumo9g02320 795 Pfam Protein kinase domain 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02320 795 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Pumo9g02320 795 MobiDBLite consensus disorder prediction 422 449 - -
Pumo9g02320 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pumo9g02320 795 FunFam serine/threonine-protein kinase-like protein CCR1 455 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02320 Pumo-Chr9 56441130 56443843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02320 9 795 Receptor kinase-like Gene Family AT3G55950 60.122 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo9g02320 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02320 - - gmx:100782916 1404.42