Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02318 ATGGCTGCTGTGTCAAACGGCGTCGAAGCAGTGCTAGAGTTTCTGCGCAAGAATGGCTTGTCGGAAGCAGAGTCCGCGCTCCGAGAAGACATCATCGAGAACACCGACCTCGGAACCTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCCCCGCCGCCGCCGGTCAGAGTCCGATCCTTCTCCCGCCCTTCCGAGCTCGCCGCCGCCGACTGCTCCAAATCCAGCTCCGATGAGTTCGTCAGCATCGGTTCTTCCACTTCTCGTGTTTCTTCTTTAGAATTCATAAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCCGAATCTTCGTCTGAAAGATTATCTCAGTTTGGCACTGCACGTGATTATCATGATTTTGAAATGCAGAATGAACCGTATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGATTTCTTTGCTTGCCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGAAAATCAGCATGACAATTCTCTGGACCTTGTTTACAACTATGAAGAATTTCAATTAGAGGGAAATAGTAATGGTGGTTTCATGGACAAGGCATGCCTTTATAATCATTCCTCTATGAAGGATGGAACTGTGACTTATTCAAAAGGGTATTGTCATGTTGATAACAAAGACCAGTTTGAAGGGGAATTAGAGGGCAAGGCTGAGAAACACACTGTTGCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGCAGTTTGGATCCTACGAACTTCAGCTACCCTAATTTGAAGGAAATCCATCTGAATGATTTTCATTTGAAGGTTGTTGGGGACATTAACTCTTTTGACTCTACTTCAGAGCTAACTGTGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAGTAAGGAGTACAACGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTAACAAATGGACTTGACACCTATAAAGCACAAGACAGTGGAGAATTAGGTGAAGAGTGCCAAGATGCAGAGATTACTGCAGATGGAGAGGATACTACTGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATTATTAAAAACGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAGCAGATGAACACCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTGTACGAATTTCAGAAGTTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAACAGATTGCAGCTCATTACTCGTCAATGTTTGGAAGCATTGCAATACTTGCATGGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAGAAGATGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTCCAAACAGACAATCTGTGTCTATATGTACAATCTCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTAGGCTGTATCTTGGCAGAGCTATGCTCTGGTGAAGTGCTGTTTCCAAATGATGCAGTTGTGATGATTCTGGCACGCATGATTGGAATGCTTGGTTCTATTGATATGGAGATGTTGGTGAAAGGGCAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAACTGGAGTACATAATTCCAGAAGAGTCATCATTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATTGACTTCGTCAGATATTTACTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAAGCACTAAGGCATCCATGGCTTTCCTATGTTTACTAG 2157 0.4117 MAAVSNGVEAVLEFLRKNGLSEAESALREDIIENTDLGTFDYEKFFFPMVPPPPPVRVRSFSRPSELAAADCSKSSSDEFVSIGSSTSRVSSLEFINPYGIRSSSQTQNDSESSSERLSQFGTARDYHDFEMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAETENQHDNSLDLVYNYEEFQLEGNSNGGFMDKACLYNHSSMKDGTVTYSKGYCHVDNKDQFEGELEGKAEKHTVACSCEVPFCKSSPGSGGSCSLDPTNFSYPNLKEIHLNDFHLKVVGDINSFDSTSELTVNQSFDYYTKNDSSKEYNGPYDLTIKVTEKDLTNGLDTYKAQDSGELGEECQDAEITADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHGLGIVHCDLKPENILIKSYRRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGSIDMEMLVKGQETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVTDTMFIDFVRYLLSINPKRRPTARQALRHPWLSYVY 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02318 718 ProSiteProfiles Protein kinase domain profile. 412 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02318 718 SMART serkin_6 412 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02318 718 CDD PKc_DYRK_like 412 714 - -
Pumo9g02318 718 MobiDBLite consensus disorder prediction 101 120 - -
Pumo9g02318 718 Gene3D Transferase(Phosphotransferase) domain 1 466 714 - -
Pumo9g02318 718 PANTHER DUAL SPECIFICITY PROTEIN KINASE 107 714 - -
Pumo9g02318 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Pumo9g02318 718 FunFam Putative serine/threonine-protein kinase dyrk2 406 493 - -
Pumo9g02318 718 SUPERFAMILY Protein kinase-like (PK-like) 401 715 IPR011009 -
Pumo9g02318 718 Gene3D Phosphorylase Kinase; domain 1 407 493 - -
Pumo9g02318 718 Pfam Protein kinase domain 414 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02318 718 FunFam Serine/threonine-protein kinase ppk15 491 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02318 Pumo-Chr9 56407826 56412900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02318 409 709 MAP Kinase Gene Family AT5G19010 32.087 1.24e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pumo9g02318 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02318 - - gmx:100783988 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02318 9 56407826 56412900 Pumo9g02318 9 56407826 56412900 ECH