Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g02301 | ATGGCCTCTCTCCAACCTCAACCCCAAGAAACCAAACCCACCGCCACCACCGCCACAGAAACCACTCCCAACGAAACATCTAACAGTAACAGCAATAGCAGCAGCAACGTCAAAAACAGTCGCAAGTGCAAAGGTAAAGGTGGCCCCGACAACAACAAATTTAGGTACCGCGGCGTGAGACAACGAAGCTGGGGCAAGTGGGTCGCCGAGATCCGCGAGCCACGTAAGCGAACGCGCAAGTGGCTCGGAACCTTCGCCACCGCCGAGGACGCCGCCAGAGCCTACGACCGCGCCGCCATCATCCTCTACGGTTCCAGAGCACAGCTTAATCTCCAACCCTCCGGTTCCTCTTCTCAATCTTCCTCTTCTCGTTCCTCTTCCTCTTCCACTCAAACCCTAAGACCCTTGCTTCCTCGCCCTTCAGGTTTTAGTTTCAATTTTCCCTTCAACGCCGCCGCCGCCACCACTGTGCCTTACCCTTATAACAATACTTACAATTACACCCCACCCGTGTTGTGCCCTATTGATAATAGTAACAATAATAGTACTATCGTGCAAGTTCATCCACAACATCACTATCGTTGTCAAGAGGAAGTGGTGCAAGTGCAAGTGCCGCATACTCTATCAACATCGTACCAACATTCTGAATCTGATGTGGGTTTAGGTGGGAATAATATTGTTGATATTTCTTCTATTAGATCAACCTCGTACCAAAGGCATGGTTACCAGGATAATAATAATAATAATAATAATAATAATAATCATGTGCATGTGCAAGTGCAACATGGGGTTTTGTCGAATCAACAGCAACATCAGAATAGCGTGGTGGAGGGAGTGAATTCCTCCTCCGTTGTGGGTTCGGTTGCGTCTTCTCAGGTAAATATGGATGCTTCGGTGGATCCGGATCTGCCGTTGGTGGGGACGGTGGGGCTTGGATCTTCGCCTTTGTGGTCGTTGGCGAATGAGGATGATTACACTGGTAGTTTGTGGGATTATAATGATCCTTTCTTCTTTGATCTTTAG | 1023 | 0.4858 | MASLQPQPQETKPTATTATETTPNETSNSNSNSSSNVKNSRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSGSSSQSSSSRSSSSSTQTLRPLLPRPSGFSFNFPFNAAAATTVPYPYNNTYNYTPPVLCPIDNSNNNSTIVQVHPQHHYRCQEEVVQVQVPHTLSTSYQHSESDVGLGGNNIVDISSIRSTSYQRHGYQDNNNNNNNNNNHVHVQVQHGVLSNQQQHQNSVVEGVNSSSVVGSVASSQVNMDASVDPDLPLVGTVGLGSSPLWSLANEDDYTGSLWDYNDPFFFDL | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g02301 | 340 | FunFam | Ethylene-responsive transcription factor 2 | 55 | 113 | - | - | |
Pumo9g02301 | 340 | PRINTS | Ethylene responsive element binding protein signature | 56 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | PRINTS | Ethylene responsive element binding protein signature | 78 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 18 | 274 | - | - | |
Pumo9g02301 | 340 | SUPERFAMILY | DNA-binding domain | 55 | 112 | IPR016177 | GO:0003677 | |
Pumo9g02301 | 340 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Pumo9g02301 | 340 | Gene3D | AP2/ERF domain | 54 | 112 | IPR036955 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | CDD | AP2 | 55 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
Pumo9g02301 | 340 | SMART | rav1_2 | 55 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Pumo9g02301 | 340 | MobiDBLite | consensus disorder prediction | 110 | 135 | - | - | |
Pumo9g02301 | 340 | Pfam | AP2 domain | 55 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo9g02301 | 340 | ProSiteProfiles | AP2/ERF domain profile. | 55 | 112 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g02301 | Pumo-Chr9 | 56191661 | 56192683 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g02301 | 41 | 340 | AP2-EREBP Transcription Factor Family | AT2G40220 | 42.771 | 2.01e-43 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pumo9g02301 | AP2 | 1.2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g02301 | K09286 | - | gmx:100779779 | 393.66 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo9g02301 | 9 | 56191661 | 56192683 | Pumo9g02301 | 9 | 56191661 | 56192683 | ECH |