Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02300 ATGTTAACGACTTCGAGAAAGCGCCTAAAACAGTTACGCACTGGAGGTCGCTCTTGTCGCTCCACGTGGCAGACGTTCTTAAAGGATCGCCGCCTGCTGGTGGTTCAGCTGACGTGGCTAGGCGACGGAGCCGCCGCAATCGGCGTCGGAATCAATCACTGCATCTGCGACGGGATCGGGAGCGCGGAGTTTCTAAACTACTTCGCCGAGTTAGCCAACGAAAAACGAGAGTTGGGTTATAGACATAAACCTATTTGGGAGCGTCACCTTATGAACCCGGCGCGTGGGAAGCAGACGCGGGTTGACTCAGCGAGTCACCCCGAGTTCATCCGAGTCCCGGATTTATGCAACTTCATGGACAAGGTCTCGACCGGGCTTAAACCGACCTCGGTGACCTTCGACAAGAGGAGACTCAACGAGCTTAAGCGACTCGCGCGGTGCACGAGTCAACCCGGCGAGTCAATGCGTTACACGTCGTTCGAGGTGCTCGCGGCGCACGTGTGGAGAAGCTGGGCGAGAGCAATAAGGTTTCCGCCGAACCAGAAGCTGAAGCTGGTGTTCAGTATAAACGTGCGGAACCGTTTGAAGCCGGGTTTGCCGGAGGGGTATTATGGGAACGCGTTTGTTTTGGGGTGCGCGGAGGCGAGTGCGAAGGAGCTGGAGGAAAGAGGGGTGGGGTTCGGGTCGGGTTTGGTGAAGCGGGCGAAGGAGAGGGTTGGGAACGAGCACGTGAGGGGCGTGATGGAGTTAGTGTGGGAGAGAAAAGCGTGCCCCGACCCGGTTGGGGTGTTGATAGTGTCGCAGTGGTCGCGGTTGGGGTTGGAGAAGATTGACGTGGGTATGGGGAAGGGTGTTCACGTGGGACCCGTGTGCTGCGATAGGTACTGTTTGTTTTTGCCGGTGAGGGATGAGTGTGTGAGTGTGAAGGTCATGGTGGCTGTCCCCACTCCTGCCGTTGACAATTACGAGCTTTTCATGCGTGCGTCGCACCTGTGA 996 0.5733 MLTTSRKRLKQLRTGGRSCRSTWQTFLKDRRLLVVQLTWLGDGAAAIGVGINHCICDGIGSAEFLNYFAELANEKRELGYRHKPIWERHLMNPARGKQTRVDSASHPEFIRVPDLCNFMDKVSTGLKPTSVTFDKRRLNELKRLARCTSQPGESMRYTSFEVLAAHVWRSWARAIRFPPNQKLKLVFSINVRNRLKPGLPEGYYGNAFVLGCAEASAKELEERGVGFGSGLVKRAKERVGNEHVRGVMELVWERKACPDPVGVLIVSQWSRLGLEKIDVGMGKGVHVGPVCCDRYCLFLPVRDECVSVKVMVAVPTPAVDNYELFMRASHL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02300 331 Gene3D - 120 326 IPR023213 -
Pumo9g02300 331 Gene3D - 12 110 IPR023213 -
Pumo9g02300 331 PANTHER ACYL TRANSFERASE 4 32 320 - -
Pumo9g02300 331 Pfam Transferase family 29 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02300 Pumo-Chr9 56178629 56180450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02300 32 326 Monolignol Biosynthesis Gene Families AT5G48930 26.537 4.81e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02300 - - gmx:100817048 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02300 9 56178629 56180450 Pumo9g02300 9 56178629 56180450 ECH
Pumo1g00275 1 4341268 4343663 Pumo9g02300 9 56178629 56180450 PCT