Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02295 ATGGGCAAGAACAGGAAACTCAGCCGGTTCAAGGATCTTTGTGGAGTTTTTCGCTTTGTGGCGGTTTTTTTCTTGTTTCAGAACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAGGCAGAAAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGATTGATGATGAAGCATCTGTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGCCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGGGCCTGAGCTTGTGAAACTTGTCAACATAAAGTCTATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAGGGATTTGTAGAACTAAAAGAATTGGAAGTTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTTGGGAGTAATATCTCACTAGCAATCCTTTTGTTGGACAACAATGAATTTCTTGTTGGTTTCTCTCCCGAAATAAATGAACTGAGGATGCTTTCTGAATGTCAAGTAGATGAAAATCAGCTAACCATTGCTACTAAAATGCCAGCTTGTACAGAAAGAGCCACCACTTGGCATATTGGTCAAGGTAAAGGTACTCGTGACCTACTAGAACTAAAAATTCCTCCACCACTTCGTGCTCATCAAGATCCTCTTTATCGTGTGGCTCATCCACCTCTTGAGAGCCCTTCTCCTCCTTCCCCATCAGTCAAAGCAAAAGCACCAGTGCCAAAGCTAGCTCCTTCTAGGAAAAATGCTTCTGATTCTCCTTCTCCCCACTCTACACCAGGTTCTGGAACACTATCTAAAACTAAACGCACTCATACAGTTCCTATTTTGGCTGGAGTTATAGGTGGTGCTGTGTTTCTTCTTTTTTCAAGCATTGGCATATATCTTTGTAAAACAAAGGTAGCTAATGTCAGACCCACGGGACTAAGTGCACAGCTTCAGAAGGCGTTTGTAACTGGTGCGCAAAAGCTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGTACACTGTACAAAGGAACTTTGTCTAGTGGCGTTGAAATAGCTGTAGCTGCTTTTGCTCCGGTAACATCATCCAAGAATTGGTCAAAGACTTTAGAAGCTCAATTTAGAAACAAGATAGATACATTGTCGAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGGTACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATTCCCCAAACGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAACGGGTATGGCTTATTGCCTGCAACATATGCACCAATTGGACCCTCCTATGGCCCTTATGAAGCTGAGTTCTTCAGCTGTTTACCTCACTGATGACTATGCTGCCAAACTCTCAGATTTAAGTTTCTCCAATGACATAATCTCAGCTGAGACAAGAGCTATTGACATGCCAATAGCAAGTCCAGAAAGTAATGTTTATAGCTTTGGTGTTCTACTATTTGAAATGGTCACTGGTCGTCTTCCTTATTCAGTGGAACAAAGGGACTCACTTGAAAACTGGGCATCACACTATTTACAAGGGGACCAGCCCCTCAAAGAAATGGTGGATCCAATTCTAGTATCTTACCAAGAAGATCAACTGGAACAAGTTGCTGCATTGATCACATCTTGTGTCCACCCTGATCCACAGCAGAGACCAACAATGAAAGATGTGAGTGAGAGACTGAGAGAGATAACAAAAATAACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGCAGAAGCACGTTGA 1917 0.4199 MGKNRKLSRFKDLCGVFRFVAVFFLFQNLGLCCSLNEEGNALLKLRQKIVSDPFGALSNWIDDEASVDPCNWFGVECSDGRVVALNLKDLCLGGTLGPELVKLVNIKSIILRNNSFSGTIPEGFVELKELEVLDLGYNNFSGHLPADLGSNISLAILLLDNNEFLVGFSPEINELRMLSECQVDENQLTIATKMPACTERATTWHIGQGKGTRDLLELKIPPPLRAHQDPLYRVAHPPLESPSPPSPSVKAKAPVPKLAPSRKNASDSPSPHSTPGSGTLSKTKRTHTVPILAGVIGGAVFLLFSSIGIYLCKTKVANVRPTGLSAQLQKAFVTGAQKLKRSDLEAACEDFSNVIGTSPIGTLYKGTLSSGVEIAVAAFAPVTSSKNWSKTLEAQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYSPNGTLFEHLHIKEAEHLDWGTRLRVATGMAYCLQHMHQLDPPMALMKLSSSAVYLTDDYAAKLSDLSFSNDIISAETRAIDMPIASPESNVYSFGVLLFEMVTGRLPYSVEQRDSLENWASHYLQGDQPLKEMVDPILVSYQEDQLEQVAALITSCVHPDPQQRPTMKDVSERLREITKITPESAVPKLSPLWWAELEIASAEAR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02295 638 Gene3D Transferase(Phosphotransferase) domain 1 434 619 - -
Pumo9g02295 638 MobiDBLite consensus disorder prediction 237 251 - -
Pumo9g02295 638 MobiDBLite consensus disorder prediction 263 283 - -
Pumo9g02295 638 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Pumo9g02295 638 MobiDBLite consensus disorder prediction 234 283 - -
Pumo9g02295 638 Gene3D Phosphorylase Kinase; domain 1 314 432 - -
Pumo9g02295 638 FunFam Nuclear pore complex protein NUP107 35 194 - -
Pumo9g02295 638 FunFam Inactive receptor-like serine/threonine-protein kinase 323 432 - -
Pumo9g02295 638 SUPERFAMILY L domain-like 41 191 - -
Pumo9g02295 638 Gene3D Ribonuclease Inhibitor 33 206 IPR032675 -
Pumo9g02295 638 PANTHER PROTEIN MALE DISCOVERER 2 15 636 - -
Pumo9g02295 638 ProSiteProfiles Protein kinase domain profile. 349 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02295 638 Pfam Protein tyrosine and serine/threonine kinase 352 607 IPR001245 GO:0004672|GO:0006468
Pumo9g02295 638 SUPERFAMILY Protein kinase-like (PK-like) 335 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02295 Pumo-Chr9 56138277 56143318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02295 23 607 Receptor kinase-like Gene Family AT5G16000 26.073 1.83e-48 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo9g02295 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02295 - - gmx:100792450 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00281 1 4387519 4391778 Pumo9g02295 9 56138277 56143318 PCT