Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02256 ATGAAGCTTGAATCTGTGTCCAACGCCAACATCACTCAAGCTGTCGAGCCTCTCCTGGCAGTGCCACGGGACTGCGAGCACTCGCCGGAGGATCCGAATCAGCAAAATGGATCAATCACCGGAGCGGTGTTCAACATTACAACCAGCATGATCGGCGCCGGAATCATGTCGGTTCCGGCGACCATGAAGGTGCTGGGAATAGTTCCGGGGTTCGTGGTGATAGTTTTGGTGGCACTGATAACAGATGTGACTGTGGAGTTCATGTTGAGGTACACGAGTTCCGGTAAATCCACTACTTACGCGGGCTTGATGGGCGAATCTTTCGGCTCCCTTGGATCCCTCGCCCTTAAGATTTGCGTCATCATTAACAATTTCGGGGTCCTCATCATCTATTTCATTATTCTTGGAGACGTGCTCTGTGGAAATGAGTCAAACGGAACCACACACTTGGGTGTTCTACAAGAATGGTTTGGCATCAATTGGTGGACCTCTCGTGCCTTTGCTCTTCTTATTGTTGCGCTCTTCATAATGCTTCCACTCGTTATGTTACGACGTGTTGATTCACTGAGGTATAGTTCTGCAATATCAATCCTACTAGCATTGGTCTTTCTTGTAATATGCTCATCAATGGCGTTTAGTGCATTGTTATCCGGCAAAAGTCAGACACTCAGAATAGTGCCTGATTTCTCTCAAGTCACTGTCCTTGATCTTTTCACCACTGTCCCAATCTTTGTCACGGGTTTCGGATTCCATGTCAATGTTCATCCAATCAGAGCAGAGCTTAGAAAAGCTGCACACATGCGTTTGGCTACGCAGATTTCGTTAATAATCTGCGTAGCAATTTACTTTGCTATTGGCTTCTTTGGGTACCTTTTGTTTGGGGATTCCATCATGCCCGATGTGTTGGTCAACTTTGACCAAAACTCCAGCACAAGTTCTGGTCAATTGCTCAATGACATTGTTCGATTAACCTATGCACTCCATCTTGCGCTTGTGTTCCCCATCATGAACTATTGCTTGAGAGCCAACATAGATGAACTAATTTTCTCTAACAAAAATAAGCCTGCCCTAGCATCAGACACCCCAAGATTTGTGTCACTCACTTTGACTTTGCTAGTCCTCACATACTTGTTGGCTGTGGCCATCCCAAACATATGGTATTTTTTTCAATTCTTGGGATCCACAACCATTGTTTGCCTATCATTCATCTTCCCTGCAGCAATTGTTCTAAGGGACATGCATGGCATATCAAAGACAAAAGATCAAGTCATGGCAATAGTGGTGATTGTTTTGGCTGTAGGGACGAGCGGAATTGCTATATGGACCAACTTGAACGGTTCAGAGGTTGATTAG 1353 0.4531 MKLESVSNANITQAVEPLLAVPRDCEHSPEDPNQQNGSITGAVFNITTSMIGAGIMSVPATMKVLGIVPGFVVIVLVALITDVTVEFMLRYTSSGKSTTYAGLMGESFGSLGSLALKICVIINNFGVLIIYFIILGDVLCGNESNGTTHLGVLQEWFGINWWTSRAFALLIVALFIMLPLVMLRRVDSLRYSSAISILLALVFLVICSSMAFSALLSGKSQTLRIVPDFSQVTVLDLFTTVPIFVTGFGFHVNVHPIRAELRKAAHMRLATQISLIICVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSSTSSGQLLNDIVRLTYALHLALVFPIMNYCLRANIDELIFSNKNKPALASDTPRFVSLTLTLLVLTYLLAVAIPNIWYFFQFLGSTTIVCLSFIFPAAIVLRDMHGISKTKDQVMAIVVIVLAVGTSGIAIWTNLNGSEVD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02256 450 PANTHER AMINO ACID TRANSPORTER 29 434 - -
Pumo9g02256 450 Pfam Transmembrane amino acid transporter protein 36 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02256 Pumo-Chr9 55803188 55816649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02256 26 444 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.524 3.72e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02256 - - gmx:100794031 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02256 9 55803188 55816649 Pumo9g02256 9 55803188 55816649 ECH
Pumo1g00308 1 4690577 4693181 Pumo9g02256 9 55803188 55816649 PCT