LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g02255	ATGAGAGAAGCCTTCGGATCCTTGGGAGCAGTAGCAGCTCAAATCGCTGTTGTAATCACTAATCTCGGGTGTTTAATTATGTACCTTATTATTATTGCGGATGTGTTTTCTGGGAATCAACGAGAAGGGGAAGTACACTTGGGTATTTTGCAACAGTGGTTTGGAGTTCACTGGTGGAATTCACGAGAATTTGCTCTGTTTGTTGTCTTGGTCTTAATTTTGCTTCCGTTGGTATTGTTCCGTCGCGTAGAGTCGTTGAAGTTCAGTTCTGCAATATCAACTCTTCTTGCTGTGGCCTTTGTTACAATATGTACTGTGTTGGCAATAGTGGCTATTGTAGAAGGAAGAACACAGTCCCCTAGACTGGTTCCTCGTTTGGACCAACATACCTCTTTCTTTGATCTGTTTACTGCAGTTCCAGTCATAGTCACAGCCTACACATTTCACTTTAATGTACATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGAAATGGCAACAGCAGTTCGAATAGCATTGCTGCTTTGTGGTGTCATTTACTTTTCAATAGGCCTATTTGGGTACCTCTTGTTTGGGGATTCAACACAGTCTGACATTCTCGTCAATTTTGACCAGAATGCTGGTTCTGCACTTGGTTCATTGCTCAATGTTTTAGTCCGTTTAAGCTATGCATTCCATGTTATGCTGGCTTTCCCTCTCCTGAACTTCTCCTTGAGAACCAACTTAGACGAATTCTTCTTCCCCAAGAAGCCTCTACTTGCCACAGACAGCAAGAGATTTGTGAGCCTCACTCTAGTGCTGCTAGTCTTAAGCTACATTGCTGCTATTGTAGTCCCAGATATTTGGTACATCTTTCAGTTCATGGGATCAACATCTGCTGTGTGCCTTGCCTTTGTCTTCCCTGGTGCTATTGTTCTAAGGGATTCTTACGGTATATCAACAAGAAGGGACAAAATTATTGCACTGGTTATGGTTATACTAGCTGCCATAACAAGTGTGATTGCTGTCTCCACCAACATATACAAAGCTTTTCAGTAG	1038	0.4249	MREAFGSLGAVAAQIAVVITNLGCLIMYLIIIADVFSGNQREGEVHLGILQQWFGVHWWNSREFALFVVLVLILLPLVLFRRVESLKFSSAISTLLAVAFVTICTVLAIVAIVEGRTQSPRLVPRLDQHTSFFDLFTAVPVIVTAYTFHFNVHPIGFELAKPSEMATAVRIALLLCGVIYFSIGLFGYLLFGDSTQSDILVNFDQNAGSALGSLLNVLVRLSYAFHVMLAFPLLNFSLRTNLDEFFFPKKPLLATDSKRFVSLTLVLLVLSYIAAIVVPDIWYIFQFMGSTSAVCLAFVFPGAIVLRDSYGISTRRDKIIALVMVILAAITSVIAVSTNIYKAFQ	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g02255	345	Pfam	Transmembrane amino acid transporter protein	2	332	IPR013057	-
	Pumo9g02255	345	PANTHER	AMINO ACID TRANSPORTER	1	331	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g02255	Pumo-Chr9	55796681	55798480	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g02255	1	342	Amino Acid or Auxin Permease AAAP Family	AT3G56200	61.111	1.93e-150	429

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g02255	-		-	gmx:100800330	624.394

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo9g02255	9	55796681	55798480	Pumo1g00308	1	4690577	4693181	PCT