Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02248 ATGAAAGCTTCAATGGCTTCTTACTACTTCCTCTTGTTTGTTCTTGTCGGTGCAACTACAGCTTCTGGGGCAGAGCTATGTACAGACTTTTACTCCTGCACCTGCCCAAACTTGTTGCCTATAGTGAAGAAAGGAGTGACCAAAGCCATTCAAAAAGAACCACGCATGGGGGCTTCCTTACTCCGATTGCATTTCCATGACTGCTTTGTAAACGGTTGTGATGCATCAATACTGTTGGATGATACAAGCAACTTCATTGGAGAGCAAACTGCAGCAGCTAACAACCAATCAGCTAGAGGGTTCAACGTGATTGATGATATTAAGGCCAGTGTGGAGCAAGAATGCCCCGGAGTGGTGTCATGTGCTGATATTCTTGCTCTGGCAGCTCGAGATTCTGTAGTTTGTTTGGGAGGACCTTCTTGGGAAGTGGGGTTGGGGAGAAGAGATTCGACTACAGCAAGCAGAGGTGATGCTAATAATAGCATTCCCGGGCCTTTCCTCAGTCTATCTGCTCTCATAAACAATTTTGCTAATCAAGGCCTCTCAGTTACAGACTTGGGGCACATACCATTGGCCTGGCAGAATGCAGAAATTTCCGAGCACACATCTACAATGACTCCAACTGTTGATCCCTCCTACCGAAAGTTCCTGCAGAGCAAGTGCCCCAGACGTGGAAATGACAAAGCACTCGAACCCCTTGACCACCAAACTCCAATCCATTTCGACTAA 729 0.4678 MKASMASYYFLLFVLVGATTASGAELCTDFYSCTCPNLLPIVKKGVTKAIQKEPRMGASLLRLHFHDCFVNGCDASILLDDTSNFIGEQTAAANNQSARGFNVIDDIKASVEQECPGVVSCADILALAARDSVVCLGGPSWEVGLGRRDSTTASRGDANNSIPGPFLSLSALINNFANQGLSVTDLGHIPLAWQNAEISEHTSTMTPTVDPSYRKFLQSKCPRRGNDKALEPLDHQTPIHFD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02248 242 PRINTS Haem peroxidase superfamily signature 234 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 Gene3D - 29 162 - -
Pumo9g02248 242 PANTHER PEROXIDASE 72-RELATED 24 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 SUPERFAMILY Heme-dependent peroxidases 26 242 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 Pfam Peroxidase 42 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Pumo9g02248 242 ProSiteProfiles Plant heme peroxidase family profile. 25 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 PRINTS Plant peroxidase signature 232 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g02248 242 FunFam Peroxidase 29 165 - -
Pumo9g02248 242 MobiDBLite consensus disorder prediction 223 242 - -
Pumo9g02248 242 CDD secretory_peroxidase 29 242 IPR033905 GO:0004601|GO:0042744
Pumo9g02248 242 Gene3D Peroxidase, domain 2 163 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02248 Pumo-Chr9 55746205 55748755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02248 24 242 Peroxidase AT5G05340 53.913 3.78e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02248 K00430 - gmx:100793973 405.986