Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02206 ATGCAAGTGGCGGCAGAACTCCAACACACCCATCACCACCAAAGCCAAAGGCAACAAGACACCACCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCCTCTCCCACGCCACCGCCGGAGACGGTAGCCCCGACAAGGTCGACGGCGAGGATCCCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCAAACCCTTGGCCTCCGTTCCATCATATATCTGTGTCCTGAGCCGTATCCGGAGGCCAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTCTATCAGTTTGGGATTGAGGGTCATAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTAAAAGTTGTCCTTGATGTCAGGAACCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGCTTGGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCTGTCTTTGATGAATACCAACGCTTTGCAGCTGCCAAAGCAAGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCCAGCCTGAAACATTTGCCCACATCCTTTTCATGTTTGAAGAGGTAA 654 0.5 MQVAAELQHTHHHQSQRQQDTTMCRQIQLTISDHTLSHATAGDGSPDKVDGEDPFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPTSFSCLKR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02206 217 Pfam Tyrosine phosphatase family 56 207 IPR004861 -
Pumo9g02206 217 MobiDBLite consensus disorder prediction 1 22 - -
Pumo9g02206 217 CDD PFA-DSP_Siw14 55 201 - -
Pumo9g02206 217 ProSitePatterns Tyrosine specific protein phosphatases active site. 150 160 IPR016130 GO:0016311|GO:0016791
Pumo9g02206 217 Gene3D Protein tyrosine phosphatase superfamily 55 204 IPR029021 -
Pumo9g02206 217 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 214 IPR020422 GO:0006470|GO:0008138
Pumo9g02206 217 PANTHER TYROSINE-PROTEIN PHOSPHATASE 40 210 - -
Pumo9g02206 217 FunFam probable tyrosine-protein phosphatase At1g05000 54 204 - -
Pumo9g02206 217 PRINTS Plant and fungal dual specificity phosphatase signature 128 142 IPR020428 GO:0016791
Pumo9g02206 217 PRINTS Plant and fungal dual specificity phosphatase signature 111 125 IPR020428 GO:0016791
Pumo9g02206 217 PRINTS Plant and fungal dual specificity phosphatase signature 55 72 IPR020428 GO:0016791
Pumo9g02206 217 PRINTS Plant and fungal dual specificity phosphatase signature 92 105 IPR020428 GO:0016791
Pumo9g02206 217 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 202 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02206 Pumo-Chr9 54865590 54869732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02206 43 217 Protein tyrosine phosphatase (PTP) family AT4G03960 74.857 4.65e-100 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02206 K18045 - gmx:100814279 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02206 9 54865590 54869732 Pumo9g02206 9 54865590 54869732 ECH