Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02193 ATGGTTGGAATTGATTCAAGAGTTGAGAAAATGAATTCACTTTTGAAACTAGAATTGAAAGACGAGGTTCGCTTTATTGGAATATGGGGCATGGGTGGTATCGGAAAGACAACTCTAGCGAGAGTTGTATTTAAGAAAATACGTAACCAATTTGATATTAGTTGCTTCCTTGAAAATGTAAGGGAGAATTCTGGGAAAAGTGATGGCATGCTTAGCTTACAAGGAACACTTCTTTCTCATATGAAAATGAAAGACTTGAAAATACAAAATTTGGATGAAGGAAAGAACATAATAGGAGGTATCTTATTCAACAACAAAGTTCTCCTCGTCCTTGATGATGTTGACGACATAAGGCAACTAGAGAATTTGGGTGTGAATGATCAAAAGTGGTTAGGCCCTGGGAGCAGGATTATAATAACAACAAGAGACATGGAAGTACTAAGATCACATGGAACAGTTGAAAGTTACAAAATTGATCTCTTAAATTCTGATGAGTCCCTTCAACTATTCAGTCAGAAAGCATTTAAAAGAGATAGACCATTAGAACATCTATTGCAGTTGTCAAAAGTGGCTGTCCAACAAGCTGGGGGCCTTCCTTTGGCCATTGAGATGATGGGTTCATCCTTCTGTGGGAGAAGTGAATCTCAATGGAAAGAATTTTTGGATGTGAAAGATTACACAAAGAAAGATGTTGTGATGGAGAAACTTGTAATAAGCTATGATGGGTTACCACCAAATTATCAGATTTTATTTCTTGATATTGCATGTTTCTTCAATGGGTGGGTAAAAGAGCATGTGACACAAATTCTAACAATTTGTAGCCGTTATCCAGCAAATGGAATTGACGTTGTAATTGACAAATCGCTAGCTACTTATGATGGATCACGTTTGGGGATGCATGATTTACATCAAGAAATGGGAAGAAAAATTGTTGTTGAAGAATGTCCTATAGATGCTGGCAAACGCAGTAGATTGTGGTCACCCCAAGACATTGATCAAGCACTGAAAAGAAATAAGGAAAATGAATTGATTCAGGGTATAGTTTTGAAATCGTCCACTCAGCCATACAATGCAAATTGGGATCCCGAAGCCTTCTCAAAGATGTACAATCTTAAATTCCTTGTAATTAATTATCACAACATACAATTTCCTCGTGGCCTCAAATGTCTATGCAGTTCATTGAAATTTCTTCAGTGGATGGGGTGTACTTTGGAAGCTTTGCCACTTGGTGTGAAGCTAGAGGAACTTGTAGAGTTGAAAATGCGTTACAGCAAAATAAAAAAGATCTGGAGTGAATCTCAAGTAAGTAGCTCACATTTTGCAAAGTTGAAGTTCATTGATCTGAGCCATTCCGAAGATTTAATTGAAAGTCCTATAGTTTCTGGGGTTCCATGTCTTGAAATTTTGCTTCTTGAAGGTTGTATAAACCTTGTCGAGGTTCACCAGTCTGTTGGACAGCACAAGAAGCTTGTTCTATTGAACTTGAAAGACTGCATAAATCTTCAAACCCTTCCAACAAAATTTGAAATGGATTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAAGTTAAAAAGCTTCCCAACTTTGGAGAAAATATGCAACGTTTATCACTGCTTAATTTGGAGAAATGCAAAAATCTTCTTTGCCTACCAAATTTTATTTGGAATCTGAAATCTCTTGGGAAGCTCAGTATCTGCGGTTGCTCAAAATTTTCTACCTTGCCCAACAGTATGAATGAAAATGGTTCTTTGGAGGAACTTGATGTGAGTGGGACTGCCATAAGAGAAATTACTTCATCCAATGTTTGTTTAGAAAATCTTAAAGAGCTCTCTTTTGGTCGAAGGAAAGAACTAGCATCCAACTCATCATGGAACTTACATCAATGGATTTCAATGCGTAGGAGGCAACAAGTCCCGAAGGAGTTGATCTTGCCTACTCTCTCGCACTTAACAAGCTTGAAGTTCTTAAATTTAAGTTATTGTGACCTTAATGATGAATCAATTCCAGATGGTCTTGGATCCTTATCATCTTTGTTGGGCTTAGATCTAAGTGGGAACAATTTTGTTAGTCCACCTACTCATTGCATTAATAATCTTCATACCCTGCAGAGTTTGACCTTAATTGATTGCCCAAGGCTTGAGTCTTTGCCTATGCTTCCACCAAATGTTCAATGCTTGTGTACAACTAATAGTACTCAAATGAAACCCTTGAATTCAGATGCATATATGCTGTGGAAGATCTATGAGTTACATATGAATCAGACATACTTTTTATATACTCCTCATTCTCTCCCTCCTCTGCCCCTTGCCCACCCTAATTATTTCCATAAAGTTTGTGTTTACCAAATGGAAGATACACCACATTTTTTGTTCATCATTCCAGGGATAGAAATTCAAAAGTGGAATGAAAATTGTTTTCTAATTGATCCATCACATCATCCATATAACATGTTATTGTTGGGTTCTGATTCAGTTGCATCAATAATGGTAGATGTACCTAACGATTGTGGGTCTAGTGGATGGTTAGGAATTGCAACATGCCTAGCATTAGAACCTTCAAATATGCAGCACTCTTCTCCATCACATGTGAGTCCACATTCCATGGGAAATGAGGAAACGTGCATTTATTATTGGGCATGTAAAGCTCCTGATGGTGAACCTGACTTGACTTTCCCCATAGGACCTAAATTTAGCCACTTAGTTCATGAATGCAATGAAGAGAAATGCCTACTTCAACTGATATTTTATGTGGAAAATCATTCTAAGCCATGGAAGCCAAGAATAAGGAAATGTGGGTGTCATGTTATATTTAAGGAAGATGTTGAAGATCGGTGCAAGCACTCAAGTGGTCCCAAATCTTCCTCAAACTCTTCCCGATGGACATACCATGTTTTCTTGAGTTTTAGAGGAGAAGACACCCGTTTAGATTTTACAGATCACTTGTACGCTGCGTTGGTGCGAAAGGGAATCATAACTTTCCGAGATGACAAACAACTCGAGAAAGGAGATGCGATAGCAGAAGAACTCCCTAGAGCAATTGAGGAGTCCCTCGGTGCCATTGTGATTCTCTCTGAGAACTATGCTTCTTCCTCTTGGTGCTTGGATGAGCTCAACAAAATTCTTGAATCAAATAGAGTGCTGGGAAGAGAAGTTTTTCCAGTCTTCTATGGGGTTAGTCCTTGTGAGGTTCAACACCAGACGACAAAGAGTTTTGATGAGGCTTTTAAGAAACATGAAAGAAGATCTGGGAAAGACACAGAAAAGGTGCAAAAATGGAGAGATTCCTTGAAGGAAGTTGGCCAAATTCCTGGCTGGGAATCCAAAAATTACCAGCATCAAACAGAGCTCATTGAAAATATTGTTGAATCGGTATGGACAAAGCTACGTCCTAAAATGCCATCTTTCAATGATGGGCTAATTGGAATTGGCTCAAGAGTTAAGAAAATGGACTCACTGTTAAGCATAGAATCGAAGGACGTTCGCTTTATCGGAATATGGGGCATGGGTGGCATTGGAAAGACAACATTAGCGAGAGTTCTCTTCAAGAAAATCAAGGATCATTTTGATATTAGCTGCTTCCTTGACAACGTTAGAGAGATTTCTAGAGAAAGCGATGGCATGCTTCGCTTACAAACAAAACTTCTCTCTCATTTGGCAATAAAAGGCTTGGAAATTAGAGATTTGGAAGAAGGAAAGAACACAATAATAAACCTTTTATCCGAGAAGAAAGTTCTACTTGTCCTTGATGATGTTGATGACACTAGCCAACTAGAGAATTTGGCTAAGAGGCTAGAATGGTTTGGACGTGGGAGCAGAGTTATAATCACAACAAGGGACATACAAGTACTAATATCACATGGAATAGTTGAAAATTATAAAATTGAGTTCTTTAAGTCGGATGAATCCCTTCAACTCTTGAGTCAGAAAGCCTTCAAAAGAGATGAACCTCAAGAGCATTATTTGGAGTTATCAAAAGTTGTTGCCAAATATGCTGGAGGCCTTCCTTTGGCCTTGGAGCTTTTAGGGAAGGTAAAAGAGCTTGCAACACAAGCTCTAGAAATCTGTGACCGTTATCCACCAGTTGGAATTGAACTTCTAGTTGAAAAATCATTGGCAACTTATGATGGCTTTACCATAGGGATGCATGATTTACTTCAAGAAACAGCAAGGGAAATTGTTTTAGAAGAATCTCATGTAGATGCTGGAAAACGTAGTAGGCTGTGGTCTCTAGCGGACACAAATCAAATATTAAAATACAGCAAGGAAAATGAATCGATTGAAGGCATAGCTTTGAACTCACCCGAAAAGGATGAAGCAAATTGGGATCCTGAAGCGTTCTCAAGGATGTATAATCTTCAACTACTTATCATAATTTTTCCTATAAAACTTGCTCGTAGCCTCAAATGTCTTAGCAGTTCATTGAAATTCCTTCAGTGGACGGAGTTTCCTTTGGAAGCTCTGCCGGTTGGTGAGCAGCTAGATGAGCTTGTAGAGTTGAAAATGTACTCCAGCAAAATAAAAAAGATTTGGAATGAAAATCAAGCTTTTGCAAAGCTGAAGTTCATTGATTTGAGCTATTCTGAAGATCTAATTCAAACTCCAATAGTTTCTGGGGCTCCATGTCTTGAAAGATTGCTTCTTATGAGTTGTATAAACCTTGTTGAGGTTCACCCATCAGTTGGACAGCACAAGAGACTTGTTGTATTGTTCATGAAAAACTGCAAAAATCTTCAAATCATGCCTAGAAAATTGGAAATGGACTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAAGTTAAAAAACTCCCAGAATTTGGGAAGAGTATGAAATCTTTATCACTGCTTAGTGTGGAGAATTGCATAAATCTTCTTTGCCTACCAAATTCTATTTGCAATTTGAAATCTCTTAGAAAACTCAACATTTCTGGCTGCTCAAAATTCCCAACACTGCCTGATGGTTTGAATGAAATTGAATCTTTGGAGGAGCTTGATGTGAGTGGCACTGCTATAAGAGAAATTACTTTATCTAAAGTTCGTTTAGAAAAACTTAAAGAGCTCACCTTTGGTGGAAGGAAAGAACTAGCATCCAACTCACAAAACTTACTTCTATGGATCTCAAAGTTTATGAGGCAACCAGATCTGAAGGAATCAATCATGCCTCCTCTTTCCAGCTTACTTGCCTTGGTGTCCTTGGATTTAAGTTACCGTGACCTTAATGATGAATCATTTCCTAGTGATCTTGGTTCTTTATCATCGTTGCAGGAGTTAGATCTAAGTAGTAACAATTTTGTTAACCCACCTGCCCAGTGCATTATTAATCTTTCTATGTTGCACAATTTGTCCTTCAATGATTGCCCAAGACTTGAATCCTTGCCAATGCTTCCACCAAATTTACAAGACTTATATGCAAATAATTGTCCTAAATTGAAACCCCATTTGGATGAAGAAACGCTATGGAAGATATTTGAGACACAATCACGTATGGATCCGATTGAAGGGCCAGAGATTTGGTTCGTCATACCCGGTAATGAAATTCCATCTTGGTTTGACAATCAAAACTACTTTGCAATTGATTCATCACATCATCCATATGACAAGTTGGGTTGTGATTCAGTTACATCAATAATAGTGGATGTACCTGAGGACTGCCAGTTAAGTGAATGGTGGGGTATTGCAGTATGCCTAGCATTAGAACCTTTAAATATGGAGAAGGAGGAGTCATCTCCTACTTGTGTGAGACCAACTTCTACTGGCAATGAGGAAATGTGTATTTATTATTGGGTCTGTAAAGCTCCTGATCGAGACCCTGACCCTAAGTTTCCTATAGCATCCAAGTTTGGACACTTGGTTTATAAATTCAATGACCCTTACATCCATATTATATTCTTGAGTGCTGATCATGTATATGTTCAGCATTATGTAAGTGGGGAACAAACCCAACTCCAATTGATATTTTTTGTGGAGAATTGTTCTAAGTCATGTAGGGCAACAATAAAGAAGTGTGGGTGCCGTGTGATATGTAAGGAAAAAATTGAAGAATGGCGCAAGCACTCAGATGGTCTTATTATATCAAGATTAACAGAAATGAATGATGATGAGGAATTCCGTCATGAATTGGAGGTGGAAGAGCCTACTTCTCCAAATACATCCTCTTCAATGGACAAACTGCAGTAA 6180 0.3824 MVGIDSRVEKMNSLLKLELKDEVRFIGIWGMGGIGKTTLARVVFKKIRNQFDISCFLENVRENSGKSDGMLSLQGTLLSHMKMKDLKIQNLDEGKNIIGGILFNNKVLLVLDDVDDIRQLENLGVNDQKWLGPGSRIIITTRDMEVLRSHGTVESYKIDLLNSDESLQLFSQKAFKRDRPLEHLLQLSKVAVQQAGGLPLAIEMMGSSFCGRSESQWKEFLDVKDYTKKDVVMEKLVISYDGLPPNYQILFLDIACFFNGWVKEHVTQILTICSRYPANGIDVVIDKSLATYDGSRLGMHDLHQEMGRKIVVEECPIDAGKRSRLWSPQDIDQALKRNKENELIQGIVLKSSTQPYNANWDPEAFSKMYNLKFLVINYHNIQFPRGLKCLCSSLKFLQWMGCTLEALPLGVKLEELVELKMRYSKIKKIWSESQVSSSHFAKLKFIDLSHSEDLIESPIVSGVPCLEILLLEGCINLVEVHQSVGQHKKLVLLNLKDCINLQTLPTKFEMDSLEELILSGCSKVKKLPNFGENMQRLSLLNLEKCKNLLCLPNFIWNLKSLGKLSICGCSKFSTLPNSMNENGSLEELDVSGTAIREITSSNVCLENLKELSFGRRKELASNSSWNLHQWISMRRRQQVPKELILPTLSHLTSLKFLNLSYCDLNDESIPDGLGSLSSLLGLDLSGNNFVSPPTHCINNLHTLQSLTLIDCPRLESLPMLPPNVQCLCTTNSTQMKPLNSDAYMLWKIYELHMNQTYFLYTPHSLPPLPLAHPNYFHKVCVYQMEDTPHFLFIIPGIEIQKWNENCFLIDPSHHPYNMLLLGSDSVASIMVDVPNDCGSSGWLGIATCLALEPSNMQHSSPSHVSPHSMGNEETCIYYWACKAPDGEPDLTFPIGPKFSHLVHECNEEKCLLQLIFYVENHSKPWKPRIRKCGCHVIFKEDVEDRCKHSSGPKSSSNSSRWTYHVFLSFRGEDTRLDFTDHLYAALVRKGIITFRDDKQLEKGDAIAEELPRAIEESLGAIVILSENYASSSWCLDELNKILESNRVLGREVFPVFYGVSPCEVQHQTTKSFDEAFKKHERRSGKDTEKVQKWRDSLKEVGQIPGWESKNYQHQTELIENIVESVWTKLRPKMPSFNDGLIGIGSRVKKMDSLLSIESKDVRFIGIWGMGGIGKTTLARVLFKKIKDHFDISCFLDNVREISRESDGMLRLQTKLLSHLAIKGLEIRDLEEGKNTIINLLSEKKVLLVLDDVDDTSQLENLAKRLEWFGRGSRVIITTRDIQVLISHGIVENYKIEFFKSDESLQLLSQKAFKRDEPQEHYLELSKVVAKYAGGLPLALELLGKVKELATQALEICDRYPPVGIELLVEKSLATYDGFTIGMHDLLQETAREIVLEESHVDAGKRSRLWSLADTNQILKYSKENESIEGIALNSPEKDEANWDPEAFSRMYNLQLLIIIFPIKLARSLKCLSSSLKFLQWTEFPLEALPVGEQLDELVELKMYSSKIKKIWNENQAFAKLKFIDLSYSEDLIQTPIVSGAPCLERLLLMSCINLVEVHPSVGQHKRLVVLFMKNCKNLQIMPRKLEMDSLEELILSGCSKVKKLPEFGKSMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGCSKFPTLPDGLNEIESLEELDVSGTAIREITLSKVRLEKLKELTFGGRKELASNSQNLLLWISKFMRQPDLKESIMPPLSSLLALVSLDLSYRDLNDESFPSDLGSLSSLQELDLSSNNFVNPPAQCIINLSMLHNLSFNDCPRLESLPMLPPNLQDLYANNCPKLKPHLDEETLWKIFETQSRMDPIEGPEIWFVIPGNEIPSWFDNQNYFAIDSSHHPYDKLGCDSVTSIIVDVPEDCQLSEWWGIAVCLALEPLNMEKEESSPTCVRPTSTGNEEMCIYYWVCKAPDRDPDPKFPIASKFGHLVYKFNDPYIHIIFLSADHVYVQHYVSGEQTQLQLIFFVENCSKSCRATIKKCGCRVICKEKIEEWRKHSDGLIISRLTEMNDDEEFRHELEVEEPTSPNTSSSMDKLQ 2059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02193 2059 ProSiteProfiles TIR domain profile. 961 1129 IPR000157 GO:0007165
Pumo9g02193 2059 SUPERFAMILY L domain-like 1382 1816 - -
Pumo9g02193 2059 Gene3D Ribonuclease Inhibitor 299 638 IPR032675 -
Pumo9g02193 2059 FunFam Disease resistance protein (TIR-NBS-LRR class) 959 1131 - -
Pumo9g02193 2059 Pfam NB-ARC domain 16 222 IPR002182 GO:0043531
Pumo9g02193 2059 Pfam NB-ARC domain 1154 1347 IPR002182 GO:0043531
Pumo9g02193 2059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 254 IPR027417 -
Pumo9g02193 2059 Gene3D - 1 155 IPR027417 -
Pumo9g02193 2059 Gene3D - 160 244 IPR042197 -
Pumo9g02193 2059 Gene3D Ribonuclease Inhibitor 1709 1824 IPR032675 -
Pumo9g02193 2059 Gene3D - 1298 1351 IPR042197 -
Pumo9g02193 2059 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 963 1606 IPR044974 GO:0006952
Pumo9g02193 2059 PRINTS Disease resistance protein signature 1163 1178 - -
Pumo9g02193 2059 PRINTS Disease resistance protein signature 1332 1346 - -
Pumo9g02193 2059 PRINTS Disease resistance protein signature 1239 1253 - -
Pumo9g02193 2059 PRINTS Disease resistance protein signature 1750 1766 - -
Pumo9g02193 2059 SUPERFAMILY Toll/Interleukin receptor TIR domain 954 1106 IPR035897 -
Pumo9g02193 2059 SMART AAA_5 1160 1301 IPR003593 GO:0016887
Pumo9g02193 2059 SMART AAA_5 22 164 IPR003593 GO:0016887
Pumo9g02193 2059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1129 1345 IPR027417 -
Pumo9g02193 2059 Gene3D - 1131 1290 IPR027417 -
Pumo9g02193 2059 Pfam TIR domain 963 1135 IPR000157 GO:0007165
Pumo9g02193 2059 Pfam Leucine Rich Repeat 416 434 IPR011713 -
Pumo9g02193 2059 Gene3D Ribonuclease Inhibitor 639 755 IPR032675 -
Pumo9g02193 2059 Gene3D - 956 1130 IPR035897 -
Pumo9g02193 2059 Gene3D Ribonuclease Inhibitor 1587 1662 IPR032675 -
Pumo9g02193 2059 Gene3D Ribonuclease Inhibitor 1441 1586 IPR032675 -
Pumo9g02193 2059 SMART till_3 962 1103 IPR000157 GO:0007165
Pumo9g02193 2059 MobiDBLite consensus disorder prediction 2036 2059 - -
Pumo9g02193 2059 SUPERFAMILY L domain-like 299 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02193 Pumo-Chr9 54573775 54582616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02193 1 613 WRKY Transcription Factor Family AT4G12020 32.713 4.30e-70 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02193 - - vun:114195147 3065.4