LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g02191	ATGCTATTATCCGTCAATTTGCTCCGTGTTGCTTTACAACTTTATCGAAGACTCCACCCTCTTTCTTGGAACCTACCAATGCTCTTAGAAAGGCAAACCTACATTGTGTACATGGGAGGACATTCTCATGGTCCAGACCCGTCGCCTAGTGATCTTGAAACAGCCACAAATTCCCATCATGATTTACTATCTTCTTACTTAGGAAGTCATGAGAAGGCCAAGGAAGCAATTATGTACTCCTATAATAAGCACATCAATGGCTTTGCTGCCCTACTTGAAGAGGAAGAAGCATCAGAGATTGCAAAAAACGCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAACACAAATTGCACACTACCAGGTCATGGGATTATCTTGGACTGGAAAAAAATGGAAGAATTCCAGCAAACTCAGCTTGGACGAAAGCAAGATTTGGAGAAAATATAATCATTGCTAATATAGATACAGGAGTTTGGCCCGAACACCCCAGTTTCCGTGACAAAGGATACGGGCCTGTCCCGTCAAAGTGGCGTGGGAAAGGTGTCTGTGAGATAGACTGTTATAATGGTACAAAGAAATATTTCTGTAACAGGAAGCTGATTGGAGCAAGAATATTCTACAAAAATCACGAGGCTCAAGGTGGGAAGATTGACGCAAGGCTACGTAGTGCACGTGACTTCGTAGGGCATGGTACCCACACACTGTCAACTGCTGGTGGTAATTTTGTTGGTGATGCAAATGTGGAAGGTAACGGGAAGGGTACTGCTAAGGGAGGGTCCCCTAGGGCTCGCGTTGTTGCCTACAAAGCATGCTGGAATAAAATGGATACAGGAGGGTGCCAGGAAGCAGACATACTAGCAGCATTTGATCAAGCCATTAATGATGGTGTTGATATCATCTCTGCCTCTGTGGGTTGGTCTCATCCCTATAAGGAAGCTTTGTTAACGGATGGGATTTCCATTGGGGCATTCCATGCAGTAGCCAAAAATATACTCGTTGTTTGCTCTGCTGGGAATGACGGTCCAGCACCTTTAAGTGTCACAAATGTCGCACCCTGGTCCTTCACCGTTGCTGCTAGCACAATGGACAGGGATTTTCTCAGCAAAATTTCTCTCAGCAATAATCAATCCATCAAGGGTGCCAGTTTTAATCGGGGCTTGCCACCATCGTCGCCATCGAAAAAGTTCTATCCCATAATTAATTCTTTCGAGGCTAGACTTCCTCATGTGTCTATTGAGGATGCTCGTCTTTGCAAACCGGGAACACTTGATCCTACCAAAGTAAGGGGGAAAATACTAGTCTGCCTTCGAGGTAATACATTAACTTCAACTAGTGAGGGCGAGCAGGGTAAACTTGCTGGCGCTGTGGCAGTTTTAGTGCAAAATGATGAGCAAAGTGGAAATTTACTTCTGGCCGAGAATCATGTTTTACCTGCTGCAAGTATCAGTGGAACCAATACCAGTTATGGCCGAAATCATGGCACAGGCGGCAATAGCAAGGAGGTTCTAGCTTACTTGAGTGCTGCAAGAACATATATAGGAGTAAAACCAGCTCCAATCATAGCTGGATTCTCATCCAGGGGTCCCAGTTCCGTGCAACCATTGATACTAAAGCCTGACATAACTGCTCCCGGTGTGAACGTAATTGCTGCTTTTACACAAGCCGTGGGTCCTTCTAATCTTGCATCAGATACACGTCGGGTCCTTTTCAATGTGCAACAGGGAACTTCTATGGCTTGCCATCATGTTGCTGGCATCGCGGGTCTTCTCAAAACATATCATCCTAATTGGAGTCCAGCAGCTATCAAGTCAGCTATTATGACTACAGCTACAACACTAGATAACAGAAATCGACCGATTCGAGACGCATTTGATAAGGTAGCAACTCCATTCGAATACGGTGCCGGACGCATTCAGCCTAACCTTGCAATTGATCCTGGACTTGTTTATGATTTAAGCACAACAGATTACTTGAAATTCTTATGTGCTTCTGGTTACAACCAAGATTTACTCAAGTTGTTTGCCAATTTGACATTCCCTTACACTTGTCCCAAGTCTTACAGAATTGAAGATTTCAACTATCCTTCAATCACGGTGCATCATCCAACGTCAAAGCCTATAAATGTTACTCGTACAGTTACAAACGTTGGGCCTCCAGGAACTTATGTTGTGAATACTCACGGGCCGAAGGGGATTAAGGTTCTTGTTCAACCATGGTCGTTGACTTTTAAGAAAACCGGAGAAAAGAAGAGGTTTCAGGTTATTCTGCAGGCCATTGCTGTGCCCCGTCATGGGTTACCTTTATTTGGGAACTTGTCTTGGACAGATGGCAAGCACAGAGTAACCAGTCCTATCGTAGTGCTGTAA	2367	0.4436	MLLSVNLLRVALQLYRRLHPLSWNLPMLLERQTYIVYMGGHSHGPDPSPSDLETATNSHHDLLSSYLGSHEKAKEAIMYSYNKHINGFAALLEEEEASEIAKNANVVSVFLSKEHKLHTTRSWDYLGLEKNGRIPANSAWTKARFGENIIIANIDTGVWPEHPSFRDKGYGPVPSKWRGKGVCEIDCYNGTKKYFCNRKLIGARIFYKNHEAQGGKIDARLRSARDFVGHGTHTLSTAGGNFVGDANVEGNGKGTAKGGSPRARVVAYKACWNKMDTGGCQEADILAAFDQAINDGVDIISASVGWSHPYKEALLTDGISIGAFHAVAKNILVVCSAGNDGPAPLSVTNVAPWSFTVAASTMDRDFLSKISLSNNQSIKGASFNRGLPPSSPSKKFYPIINSFEARLPHVSIEDARLCKPGTLDPTKVRGKILVCLRGNTLTSTSEGEQGKLAGAVAVLVQNDEQSGNLLLAENHVLPAASISGTNTSYGRNHGTGGNSKEVLAYLSAARTYIGVKPAPIIAGFSSRGPSSVQPLILKPDITAPGVNVIAAFTQAVGPSNLASDTRRVLFNVQQGTSMACHHVAGIAGLLKTYHPNWSPAAIKSAIMTTATTLDNRNRPIRDAFDKVATPFEYGAGRIQPNLAIDPGLVYDLSTTDYLKFLCASGYNQDLLKLFANLTFPYTCPKSYRIEDFNYPSITVHHPTSKPINVTRTVTNVGPPGTYVVNTHGPKGIKVLVQPWSLTFKKTGEKKRFQVILQAIAVPRHGLPLFGNLSWTDGKHRVTSPIVVL	788

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g02191	788	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	29	118	IPR037045	-
	Pumo9g02191	788	Gene3D	-	363	513	-	-
	Pumo9g02191	788	Pfam	Subtilase family	146	617	IPR000209	GO:0006508\|GO:0008236
	Pumo9g02191	788	Pfam	Peptidase inhibitor I9	33	118	IPR010259	-
	Pumo9g02191	788	SUPERFAMILY	Subtilisin-like	117	648	IPR036852	GO:0004252\|GO:0006508
	Pumo9g02191	788	ProSiteProfiles	Serine proteases, subtilase domain profile.	122	644	-	-
	Pumo9g02191	788	FunFam	Subtilisin-like protease SBT1.5	148	384	-	-
	Pumo9g02191	788	PRINTS	Subtilisin serine protease family (S8) signature	226	239	IPR015500	-
	Pumo9g02191	788	PRINTS	Subtilisin serine protease family (S8) signature	574	590	IPR015500	-
	Pumo9g02191	788	PRINTS	Subtilisin serine protease family (S8) signature	146	165	IPR015500	-
	Pumo9g02191	788	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	787	IPR045051	-
	Pumo9g02191	788	CDD	Peptidases_S8_3	115	611	IPR034197	-
	Pumo9g02191	788	FunFam	Subtilisin-like protease SBT5.3	26	118	-	-
	Pumo9g02191	788	Gene3D	-	661	788	-	-
	Pumo9g02191	788	CDD	PA_subtilisin_like	370	483	-	-
	Pumo9g02191	788	Pfam	Fibronectin type-III domain	691	787	IPR041469	-
	Pumo9g02191	788	Gene3D	Peptidase S8/S53 domain	148	657	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g02191	Pumo-Chr9	54525884	54532999	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g02191	30	787	Subtilisin-like Serine Gene Family	AT2G04160	51.319	0.0	760

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g02191	-		-	gmx:100796255	1295.41