Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02187 ATGATGTTCACTAAGCTTTCATTAATTCGTCTAATTCTCTGTTCACTCTTAAGCCTCCATTCCTCCCAACTTTTCACGTTATCTTCTTTTGCCTTTGCTGCCATCACTGCTTATGAAGAGACGGAAGCAAGTGCTCTACTTGAGTGGAGAACTAGCCTTGACAACCAAAGCCAAGCTTCTTTATCTTCATGGACCAGTGGTGCCAGTCCTTGCACGTGGAAAGGAATCATTTGTGACAAATCCAATTTTGTTACCACTATAAATGTTGCAAATCTTGGGCTAAAAGGTACCCTTCACAGTCTCAACTTCTCATCCTTTCCCAAGCTGCTAACTCTGGATATTAGTTACAACAGTTTTAATGGAACCATTCCTCAGCAAATTGGTAACTTGTCCAGAGTTTCTCAATTGATAATGAATGATAATCATTTTAGTGGTTCAATCCCAATCTCCATGATGAAGTTGGCTAGCTTGTCAATTCTAAACTTGATACGCAATAACCTTTCTGGCTCTATTCCTGAGGAGATTGGAGAGTTGCGGAACTTGGTGCTTCTATTACTTGAATCAAATCGACTTTCTGGTACCATTCCTCCAACAATTGGAATGTTGGCCAACATCGTTGAACTTGATTTGCAAGGTAACTCTATCTCTGGCACAATCCCCCCTTCAATCAGAAACTTGACAAATTTAAAATTCCTTGAGCTCGGACAAAATAGTCTCTCTGGCCCCATTCCACCCTACATAGGAGACTTGCCCAATTTGCTTGTTTTTGAAATCTATCAAAATAACTTTTCAGGACCAATTCCTTCCCATATTGGAAACTTGACAAAGCTGGTCAATCTGTCCATGGCCATTAACATGATTTCTGGATCAATTCCTACCTCCATGGGAAACTTGGTCAATCTAATGGGCTTAGAACTTTCTAGGAACAATATTTCCGGAGTCATTCCTTCCAACTTAGGAAATTTGACAAACCCCGCCTTTTTAAGTGTGTCTTATAACCAACTTCATGGCAGATTACCACCAGGAATGAATAACTTTACCAATTTAATGAACTTACAACTAGGTACCAATAGTTTCACTGGCCCTTTGCCACAACAAATTTGCCTTGGTGGGTTACTTGGCAGATTTTCTGCTGACGGTAATCATTTCACCGGTCCAGTCCCAAAAAGCCTGAAAAACTGCTCCAGTCTTAAAAGACTCAGACTAGATGGAAACCAGTTGATCGGAAATATATCAGATGATTTTGGTGTATATCCAGAGTTGAACTACGTTGATCTGAGTAGCAATAATTTTTATGGCCACATTTCACCAAATTGGGCAAAGTGTCCTAGTCTCACAAGTCTTAGGATGTCCAACAACAATTTATCCGGTGGTTTACTACCAGAACTCGGCCAGGCACCCAAGTTACAAGAAATTGTCTTGTCTTCAAATCATCTAACAGGAAAAATTCCAAAAGAACTTGGGAAGTTGACCTCTTTGTTGGAGCTATCAATAGGGAACAATGAACTTTCTGGCCCCATTCCTACAGAAATAGGAGCTTTATTGAACCTTACAAAACTGGAGCTTGCAGCAAATAGTTTAGGTGGCCCCATGGTTTTAAATTGCGGTTGCGGTTGCAATTGCGGTCGCGAAAGCATTCCTTCGGAATTTAACCAATTGCAATCTCTTCAAGATCTTGATCTTAGTAGGAATTTGTTAAATGGAGAAATACCACCAGCACTCGCAAGTTTGAAAAGATTAGAAAGGCTAAACCTCTCACACAACAATCTCTCTGGAGCCATTCCTGATTTTAAGGATAGCTTGGCAATTGTTGACATATCTAACAACCAATTGGAGGGTTCAATTCCTAATATTCCAGCCTTTCTTAATGCTTCATTTGATGCATTGAAAAATAATAAAGGCTTGTGTGGAAATGCCTCCGGTTTGGTGCCTTGCCCAAAGTTGAGTCACAACCCTCGTGGTAAAATGAAAAGAAATGTCATCAAGTTGGCATTAGTCCTTACTTTGGGTTCTCTATTTCTAGTAGCATTCGTGGTTGGAGTTTCGTTATGTATTCGCTATCGAAGAGCAACAAAAGGCAAAAAGGAGGCTAAAGAAGAACAAACTCACGATCATTATTCCATATGGAGTTATGATGGAAAATTAGTGTATGAAGATATCATTGAAGCCACAGAGGGGTTTGATGACAAATATCTCATTGGAGAAGGAGGGTCTGCATCTGTTTATAAGGCAGAATTACCCACAGGACAGATTGTTGCTGTGAAAAAACTTCATGCTGCACCCAACGAGGAAACTCTTGATTTAAGTGCTTTTACAACCGAGGTTAAAGCCTTGGCAGAAATCAAGCATCGTAACATTGTGAAGTCACTTGGATATTGTTTACATTCACGCTTCTCCTTTTTGGCTTATGAGTTCCTAGAGGGGGGTAGCTTGGATAAAGTACTAAACAATGACACACGTGCAACAATGTTTGATTGGAAAAGGAGGGTGAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGATTATGAAGCCCACATCTCTGACTTTGGAACAGCTAAAATTATGTATCCTGATTCACGCAATTTAACCTCTTTTGCAGGCACCTTTGGGTATGCTGCACCAGAGCTTGCTTATACTATGGAAGTGAAAGAGAAATGTGATGTCTTTAGTTTTGGAGTGCTTTGTTTGGAAATAATGATGGGAAAGCATCCAGGAGATCTCGTTTCTTCATTATTTTCACCCTCTGGAACGTCATCAGTGTCTAATTTGCTGTTAAAAGATGTGTTGGACCAACGACTACCTCATCCAGAGAAGCCAGTTGTTGAGGAGGTGATCTTGATTGCAAAAATAACATTTGCTTGCTTAAGTGAAAGTCCACATTTTCGCCCAAGCATGGAACAAGTGTATAACGAGTTTGTGATGCCAAAATCATCTTCTGTGAATTTTTTCTCCATGATCACACTTGGTCAACTCAACTCGTAG 3057 0.4004 MMFTKLSLIRLILCSLLSLHSSQLFTLSSFAFAAITAYEETEASALLEWRTSLDNQSQASLSSWTSGASPCTWKGIICDKSNFVTTINVANLGLKGTLHSLNFSSFPKLLTLDISYNSFNGTIPQQIGNLSRVSQLIMNDNHFSGSIPISMMKLASLSILNLIRNNLSGSIPEEIGELRNLVLLLLESNRLSGTIPPTIGMLANIVELDLQGNSISGTIPPSIRNLTNLKFLELGQNSLSGPIPPYIGDLPNLLVFEIYQNNFSGPIPSHIGNLTKLVNLSMAINMISGSIPTSMGNLVNLMGLELSRNNISGVIPSNLGNLTNPAFLSVSYNQLHGRLPPGMNNFTNLMNLQLGTNSFTGPLPQQICLGGLLGRFSADGNHFTGPVPKSLKNCSSLKRLRLDGNQLIGNISDDFGVYPELNYVDLSSNNFYGHISPNWAKCPSLTSLRMSNNNLSGGLLPELGQAPKLQEIVLSSNHLTGKIPKELGKLTSLLELSIGNNELSGPIPTEIGALLNLTKLELAANSLGGPMVLNCGCGCNCGRESIPSEFNQLQSLQDLDLSRNLLNGEIPPALASLKRLERLNLSHNNLSGAIPDFKDSLAIVDISNNQLEGSIPNIPAFLNASFDALKNNKGLCGNASGLVPCPKLSHNPRGKMKRNVIKLALVLTLGSLFLVAFVVGVSLCIRYRRATKGKKEAKEEQTHDHYSIWSYDGKLVYEDIIEATEGFDDKYLIGEGGSASVYKAELPTGQIVAVKKLHAAPNEETLDLSAFTTEVKALAEIKHRNIVKSLGYCLHSRFSFLAYEFLEGGSLDKVLNNDTRATMFDWKRRVKVVKGVANALYHMHHGCFPPIVHRDISSKNVLIDLDYEAHISDFGTAKIMYPDSRNLTSFAGTFGYAAPELAYTMEVKEKCDVFSFGVLCLEIMMGKHPGDLVSSLFSPSGTSSVSNLLLKDVLDQRLPHPEKPVVEEVILIAKITFACLSESPHFRPSMEQVYNEFVMPKSSSVNFFSMITLGQLNS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02187 1018 Gene3D Transferase(Phosphotransferase) domain 1 806 1007 - -
Pumo9g02187 1018 Gene3D Phosphorylase Kinase; domain 1 687 805 - -
Pumo9g02187 1018 FunFam Nuclear pore complex protein NUP107 39 197 - -
Pumo9g02187 1018 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Pumo9g02187 1018 SUPERFAMILY L domain-like 62 406 - -
Pumo9g02187 1018 SMART LRR_typ_2 577 599 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 202 225 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 553 576 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 298 322 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 106 130 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 226 250 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 154 178 IPR003591 -
Pumo9g02187 1018 SMART LRR_typ_2 490 514 IPR003591 -
Pumo9g02187 1018 FunFam Leucine-rich repeat receptor protein kinase MSP1 690 805 - -
Pumo9g02187 1018 FunFam MDIS1-interacting receptor like kinase 2 806 1003 - -
Pumo9g02187 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 366 649 - -
Pumo9g02187 1018 SUPERFAMILY L domain-like 292 621 - -
Pumo9g02187 1018 PANTHER LEUCINE RICH REPEAT KINASE 2 271 1003 - -
Pumo9g02187 1018 ProSitePatterns Protein kinases ATP-binding region signature. 733 756 IPR017441 GO:0005524
Pumo9g02187 1018 ProSiteProfiles Protein kinase domain profile. 727 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02187 1018 Gene3D Ribonuclease Inhibitor 190 303 IPR032675 -
Pumo9g02187 1018 Pfam Protein kinase domain 729 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02187 1018 Gene3D Ribonuclease Inhibitor 38 189 IPR032675 -
Pumo9g02187 1018 ProSitePatterns Tyrosine protein kinases specific active-site signature. 851 863 IPR008266 GO:0004672|GO:0006468
Pumo9g02187 1018 SUPERFAMILY Protein kinase-like (PK-like) 707 996 IPR011009 -
Pumo9g02187 1018 Gene3D Ribonuclease Inhibitor 371 647 IPR032675 -
Pumo9g02187 1018 Pfam Leucine rich repeat 550 590 IPR001611 GO:0005515
Pumo9g02187 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 272 363 - -
Pumo9g02187 1018 Gene3D Ribonuclease Inhibitor 304 370 IPR032675 -
Pumo9g02187 1018 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 204 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02187 Pumo-Chr9 54377227 54380924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02187 29 925 Receptor kinase-like Gene Family AT4G08850 42.418 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo9g02187 Pkinase 5.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02187 - - gmx:100797314 1537.32