Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02178 ATGTACTCGTACAATAAGCACATCAATGGCTTTGCTGCCCGACTTGAAGAGGAAGAAGCATCAGAGATTGCAAGTCATGGGATTTTCTTGGACTGGAAAAAAAATGGAACAATTCCTGCCAACTCCGCTTGGCGGAAAGCAAGATATGGAGAAAATATAATCATTGCTAATATCGATACAGGCGTTTGGCCCGAACACCCCAGTTTCAGCGACAAAGGATACGGGCCTATCCCTTTAAAGTGGCGTGGGAAAGGTGTCTGTGAGATTAACAGTTATAATGTTACAAAGAAATCTTTTTGTAACAGTCAGAGAAAGATCTTAAAGACTATGATGTGGCGGCTGAAATTGGACGAAGGAGGGTGCCAGGGAGCAGACTTACTAGATGCATTTGATCATGCCATAGATGATGGCGTTGATATCATCTCTGTCTCTGTGGGTTGGCCTACTCCCTATATCGAAGCTTTGCTTACAGATGGCATTTCCATAGGGTCATTCCATGCAGTCGCCATAAAGGACATTTTAGCTTACCTGAGTGAAGCAAAAACATATCTAGGACCTGACATAACTGCTCCTGGTGTGAACGTAATTGCTGCTTTTACGCAAGCAACTGGCCCATCTGATCTTGCATCAGATCGACGTCGGTTTCTTTTCAATGTGCAACAGGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGTGGGTCTTCTCAAGACATATCACCCTGATTGGAGTCCAGCAGCTATCAAATCAGCTATTATGACCACAGCCGGACACATTCAGCCTAACCCTGCTATTCACCCTGGACTTGTTTATGATTTAAGCAGAAATGATTACTTGAACTTCTTATGTGCTTCTGGTTACAATGAAGCTTTACTCAGGCTCCTTGCCAATCTGAAAACCTCTTACACTTGTCCAAAGTCTTACAGAATTGAAGATTTCAACTATCCTTCAATTACAGTGCATCATCCTGGGTCAAAGCCTGTAAATGTTACTCGTACAGTTACAAACGTTGGGCCTCCAAGCACATATGTTGTGAATACTCACTGGCCAAAAGGGATTAAGGTTCTTGTTCAACCAAGTTCATTGACTTTTACGAAAACTGGAGAAAAAAAGAAGTTTCAGGTTATTCTGCAGGCAATTGGTTTTCCCCGTCATGGGTTACCTATGTTTGGGAACTTGTCTTGGACAGATGGCAAGCACAGAGTAACCAGTCCTATCGTAGTGCTCTAA 1233 0.4315 MYSYNKHINGFAARLEEEEASEIASHGIFLDWKKNGTIPANSAWRKARYGENIIIANIDTGVWPEHPSFSDKGYGPIPLKWRGKGVCEINSYNVTKKSFCNSQRKILKTMMWRLKLDEGGCQGADLLDAFDHAIDDGVDIISVSVGWPTPYIEALLTDGISIGSFHAVAIKDILAYLSEAKTYLGPDITAPGVNVIAAFTQATGPSDLASDRRRFLFNVQQGTSMSCPHVAGIVGLLKTYHPDWSPAAIKSAIMTTAGHIQPNPAIHPGLVYDLSRNDYLNFLCASGYNEALLRLLANLKTSYTCPKSYRIEDFNYPSITVHHPGSKPVNVTRTVTNVGPPSTYVVNTHWPKGIKVLVQPSSLTFTKTGEKKKFQVILQAIGFPRHGLPMFGNLSWTDGKHRVTSPIVVL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02178 410 ProSiteProfiles Serine proteases, subtilase domain profile. 31 278 - -
Pumo9g02178 410 Gene3D - 283 410 - -
Pumo9g02178 410 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 38 IPR037045 -
Pumo9g02178 410 Gene3D Peptidase S8/S53 domain 52 101 IPR036852 GO:0004252|GO:0006508
Pumo9g02178 410 Gene3D Peptidase S8/S53 domain 181 279 IPR036852 GO:0004252|GO:0006508
Pumo9g02178 410 Gene3D Peptidase S8/S53 domain 118 169 IPR036852 GO:0004252|GO:0006508
Pumo9g02178 410 PRINTS Subtilisin serine protease family (S8) signature 50 69 IPR015500 -
Pumo9g02178 410 PRINTS Subtilisin serine protease family (S8) signature 221 237 IPR015500 -
Pumo9g02178 410 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 101 IPR045051 -
Pumo9g02178 410 SUPERFAMILY Subtilisin-like 36 264 IPR036852 GO:0004252|GO:0006508
Pumo9g02178 410 Pfam Subtilase family 172 257 IPR000209 GO:0006508|GO:0008236
Pumo9g02178 410 Pfam Fibronectin type-III domain 313 409 IPR041469 -
Pumo9g02178 410 ProSitePatterns Serine proteases, subtilase family, serine active site. 222 232 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02178 Pumo-Chr9 53559948 53564672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02178 1 84 Subtilisin-like Serine Gene Family AT5G59810 48.544 8.39e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02178 - - gmx:100796255 380.563