Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02169 ATGGCCACAATCATGTGCAGCACCACCACCATAACGCTCCTACTCCTCCTCTTCACTTCCTCCATCCCAAAATCTCAATCCCAACAAGAGTATGTAAACAACAAACAATTAGACTGTGACAATGAATACAACTCCACAAAGGGCAACCTCTGCAACAGCGTTCCATCTTGCACATCCTACCTCACTTTCAAGTCCTTCCCGCCGGAGTACTCCACCCCCGCCGCCATCTCCTTCCTCCTCAACTCCACCCCCGCCCTCATCGCCGCCTCCAACAACATCACCGACGTCCAGCCCATCCCCGCCGACATCCTCGTCACCGTCCCCGTCAACTGCTCCTGCTCCGGCCCCTACTACCAGCACAACGCCTCCTACACCCTCAAACAACAGGGCGAAACCTACTTCTCCATCGCCAACAACACCTACCAGGCCCTCACCACCTGTCAGGCCCTCATGCTTCAAAACTCCTACGGCCAACGCGACCTCCTCAAGGGCCAGACCCTCCACGTGCCTCTCAGGTGCGCCTGCCCCACGCAGAAACAGCGCGAAGCAGGGTTCAAGTACTTGCTCACATACTTGGTCTCTCAGGGTGAATCGGTTTCCGCCATTGGAGACATCTTCGGCGTTGACGAACAGAGCATTCTCGACGCAAACGAGCTTTCTGCTACTTCCGTTATTTTCTACTTCACGCCGATTTCGGTTCCTTTGAAAACAGAGCCGCCGCCGACGTTACACAGAGCAGCCACTCCGCCGGAGGATTCCCCCTCGCCGCCGCCGCCGGCTCCGACGGGGGACGGAGGTTCCGACTCTTCCAAGAAATGGGTCATTGTCGGAGTCGTGGTTGGGGTTGTTGTGTTGCTTCTTTTGGGCGCTGCTCTGTTTTTCCTCTGTTTCTATCGGCGGCGGCGGGCGCAGCCGCCGCCTCCGCTCCCTCCGGCGAAGGCTTTCTCGGGTTCTACCACTACGGGGGCGACTCTTCCGACGACGCAATCGTGGTCTCTTTCTTCGGAAGGGGTTCGCTACGCGATTGAGTCGTTGAGTGTGTACAAGTTTGAGGAGTTGCAGAAGGCAACGGGGTTCTTCGGTGAAGAGAACAAAATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTACGCTGCGGTGAAGATTCTCAAAGGGGATGTGTCGGGTGAGATTAACCTTCTCAAGAGGATTAACCACTTCAACGTTATAAGGTTGTCGGGTTTTTGTGTCTACAAAGGTGACACCTATCTTGTGTACGAGTTTGCGGAGAATGATTCTCTTGAGGATTGGCTTCACAGTGGTAATAAGAAGTACGAGAATTCGGTGTCTTTGAGTTGGGTTCAGAGGGTTCACATTGCTCATGATGTTGCTGACGCGCTTAACTACCTTCATAACTATACTAGTCCTCCTCATGTGCATAAGAATTTGAAGAGTGGGAACGTGCTTTTGGATGGGAATTTTAGGGCTAAAGTTTCGGATTTTGGATTGGCAAGAGCAGTGGAGGATCAAGGGGGTGATGGGGGATTTCAATTGACAAGGCATGTGGTGGGGACTCAAGGGTACATGCCACCAGAGTACATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCGTTTGGGGTTGTGCTTTTGGAGCTTCTTTCTGGAAGAGAGGCCGTTGGTGGGGATAAGAATGGATCTGGGGAGCAGATGCTGTCGGTAACTGTGAATCACGTGCTTGAAGGAGAGAATGTTAGACAGAAACTTCGAGGTTTCATGGATCCAAATTTGAGAGATGAATATCCTTTGGAACTGGCTTATTCCTTGGCTGAACTTGCCAAATGCTGTGTTGCTCGTGACCTCAATTCAAGACCACAGATTTCTGAAGTTTTCATGACTTTGTCCAAGATTCAATCCTCTACGTTGGATTGGGATCCGTCTGACGAGGTTGAACGGTCTAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 1983 0.5144 MATIMCSTTTITLLLLLFTSSIPKSQSQQEYVNNKQLDCDNEYNSTKGNLCNSVPSCTSYLTFKSFPPEYSTPAAISFLLNSTPALIAASNNITDVQPIPADILVTVPVNCSCSGPYYQHNASYTLKQQGETYFSIANNTYQALTTCQALMLQNSYGQRDLLKGQTLHVPLRCACPTQKQREAGFKYLLTYLVSQGESVSAIGDIFGVDEQSILDANELSATSVIFYFTPISVPLKTEPPPTLHRAATPPEDSPSPPPPAPTGDGGSDSSKKWVIVGVVVGVVVLLLLGAALFFLCFYRRRRAQPPPPLPPAKAFSGSTTTGATLPTTQSWSLSSEGVRYAIESLSVYKFEELQKATGFFGEENKIKGSVYRASFKGDYAAVKILKGDVSGEINLLKRINHFNVIRLSGFCVYKGDTYLVYEFAENDSLEDWLHSGNKKYENSVSLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGNVLLDGNFRAKVSDFGLARAVEDQGGDGGFQLTRHVVGTQGYMPPEYIENGLITPKMDVFAFGVVLLELLSGREAVGGDKNGSGEQMLSVTVNHVLEGENVRQKLRGFMDPNLRDEYPLELAYSLAELAKCCVARDLNSRPQISEVFMTLSKIQSSTLDWDPSDEVERSRSVSQISDSR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02169 660 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 644 - -
Pumo9g02169 660 SUPERFAMILY Protein kinase-like (PK-like) 344 631 IPR011009 -
Pumo9g02169 660 Gene3D Transferase(Phosphotransferase) domain 1 424 653 - -
Pumo9g02169 660 MobiDBLite consensus disorder prediction 642 660 - -
Pumo9g02169 660 SMART LysM_2 123 170 IPR018392 -
Pumo9g02169 660 SMART LysM_2 190 234 IPR018392 -
Pumo9g02169 660 MobiDBLite consensus disorder prediction 238 267 - -
Pumo9g02169 660 ProSiteProfiles LysM domain profile. 189 233 IPR018392 -
Pumo9g02169 660 MobiDBLite consensus disorder prediction 243 263 - -
Pumo9g02169 660 ProSiteProfiles Protein kinase domain profile. 282 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02169 660 Pfam Protein kinase domain 388 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02169 660 Pfam LysM domain 191 234 IPR018392 -
Pumo9g02169 660 Pfam LysM domain 128 170 IPR018392 -
Pumo9g02169 660 Gene3D Phosphorylase Kinase; domain 1 325 423 - -
Pumo9g02169 660 FunFam PTI1-like tyrosine-protein kinase 3 424 645 - -
Pumo9g02169 660 MobiDBLite consensus disorder prediction 641 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02169 Pumo-Chr9 53142179 53144661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02169 1 653 Receptor kinase-like Gene Family AT2G33580 53.709 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo9g02169 Pkinase 8.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02169 - - gmx:100818534 1098.96