Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02154 ATGGAACTCAAAAAATGGTTACTGTTCTTTTTGTTGCTGGAGTGTGTTTGTTGCAATGTGGAATCCAAGTGTGTGAAGGGATGTGATGTAGCTTTAGCTTCCTACTATGTCAGTCCAGGGTATTTACTCTTAGAAAATTTAACGCGCTTGATGGAATCAAGTGTTTTGTCCAATTCTGATGTTATAATAAGCTATAATAAAGACAAAATATTCAATGGAAATGTGCCATCCTTTGCCAGAACCAATATTCCTTTCCCCTGTGATTGTATTGATGGTGAGTTTCTGGGGCATGTGTTTGAGTACTCAGCTGCTGCAGGTGACACCTATGATTCCATTGCCAAAGTGACTTATGCCAATCTCACCACTGTTGAGCTTTTGCGGAGGTTCAACACTTATGACCAAAATGATATACTCGCAAATGCCAAGGTTAATGTCACAGTCAATTGTTCATGTGGGAACAGCCAAGTTTCAAAAGATTATGGGCTGTTTATTACCTATCCACTCAGGCCAGGGAATAATTTGCATGATATTGCCAACGAGGCTCGTCTTGATGCAAAGTTGCTGCAGAGTTACAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGATTGTTTTCATTCCAGGAAGAGTGCTGCATGTTGGAATATCTATAGCAGGAATATGCGGTCTTCTATTATTAGTAATTTGCATATATGTTAAATACTTCCAGAAGAAGGAAGGAGAGAAAGCTAAATTGCCAACAGAAAATTCTATGGCGTTTTCAACTCAAGATGAATATGAAACTTCAGGATCCAGTGGGACTGCTACTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGAGAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAACTGCAATTAAGAAGATGGATGTGCAAGCATCGACAGAATTTCTTTGCGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTTGAGGGATCCCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAGGATCCTTTGCCATGGTCTAGCCGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACTGTGCCTGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTAGATGTATATGCTTTTGGAGTTGTCCTTTATGAACTTATTTCTGCAAAGAATGCTGTTCTTAAGACAGGTGAATCTGTTGCTGAATCAAAGGGCCTTGTAGCTTTTTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAAGTATTCGCAAACTGGTTGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCAGTTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTACTACGCCCAAGTATGAGGTCTATAGTTGTAGCTCTTATGACACTTTCATCACCTACTGAGGATTGCGATGATGACGCTTCCTACGAAAATCAAACTCTCATAAATCTACTATCTGTGAGATGA 1656 0.3992 MELKKWLLFFLLLECVCCNVESKCVKGCDVALASYYVSPGYLLLENLTRLMESSVLSNSDVIISYNKDKIFNGNVPSFARTNIPFPCDCIDGEFLGHVFEYSAAAGDTYDSIAKVTYANLTTVELLRRFNTYDQNDILANAKVNVTVNCSCGNSQVSKDYGLFITYPLRPGNNLHDIANEARLDAKLLQSYNPGVNFSKESGIVFIPGRVLHVGISIAGICGLLLLVICIYVKYFQKKEGEKAKLPTENSMAFSTQDEYETSGSSGTATGLTGIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVDVYAFGVVLYELISAKNAVLKTGESVAESKGLVAFFEEALNQSNPSESIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDASYENQTLINLLSVR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02154 551 SMART serkin_6 294 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02154 551 SUPERFAMILY Protein kinase-like (PK-like) 275 523 IPR011009 -
Pumo9g02154 551 Gene3D Transferase(Phosphotransferase) domain 1 428 546 - -
Pumo9g02154 551 FunFam LysM receptor kinase 2 273 364 - -
Pumo9g02154 551 Gene3D Transferase(Phosphotransferase) domain 1 365 427 - -
Pumo9g02154 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Pumo9g02154 551 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 429 IPR044812 GO:0019199|GO:0045087
Pumo9g02154 551 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Pumo9g02154 551 Gene3D Phosphorylase Kinase; domain 1 274 364 - -
Pumo9g02154 551 ProSiteProfiles Protein kinase domain profile. 294 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02154 551 Pfam Protein tyrosine and serine/threonine kinase 295 425 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02154 Pumo-Chr9 52999756 53004066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02154 1 551 Receptor kinase-like Gene Family AT3G21630 50.562 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo9g02154 PK_Tyr_Ser-Thr 5.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02154 - K13429 gmx:100792559 925.235