Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02116 ATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCAAAAAGCTATCAGTTTGAGAATCCTGGTTCCCTCAAAGTCTCCTCTCCAGATAAACTGGTTGGAGACTTGCATATATTTGACAGATCCTTGATGCTAACTGCAGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGACTCTGGTCATGAATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTACTTGGGGCCAAAGGAACATGAGAAACTGATTATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCACGAGACAGATGAAAGAAATCTCCATCCTTTGTCTCTTGATGAAAGGCTCAGGGTGGCTGTAGAGGTGGCGCAATGTCTGCATTTCTTACACGATGAGAAAGCTATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAGAAATGTCCTCCTCACTGACTACAGCCTGCACAGGATACTCACTGCTGCTGGTACTGCTGAGCAAGTTCTGAATGCTGGTGCACTTGGTTATCGGCCTCCTGAGTTTGCTAGATCAAGCAAACCATGCCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAACTCTGGAGAAATTGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGGTTTTTGGCCGAACAAGACCGTTCAAACCAGTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGGGAAAGACCATCTAAAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGATATGGAAACTGTCTTTGGTGATCTCTCAACAATAAGCTCTCCACAGGCATTATAA 1020 0.4314 MSILSPSNPSSSKSYQFENPGSLKVSSPDKLVGDLHIFDRSLMLTAEELSCAPAEVIGRSCHGTLYKATLDSGHELAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHETDERNLHPLSLDERLRVAVEVAQCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSNQCFDRSLVDKHNGERPSKILDDMLKVALRCILPASDRPDMETVFGDLSTISSPQAL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02116 339 MobiDBLite consensus disorder prediction 1 22 - -
Pumo9g02116 339 Pfam Protein tyrosine and serine/threonine kinase 55 327 IPR001245 GO:0004672|GO:0006468
Pumo9g02116 339 Gene3D Transferase(Phosphotransferase) domain 1 130 338 - -
Pumo9g02116 339 SUPERFAMILY Protein kinase-like (PK-like) 54 330 IPR011009 -
Pumo9g02116 339 Gene3D Phosphorylase Kinase; domain 1 57 129 - -
Pumo9g02116 339 FunFam Leucine-rich repeat receptor-like protein kinase 36 128 - -
Pumo9g02116 339 PANTHER OS07G0626500 PROTEIN 4 334 - -
Pumo9g02116 339 ProSiteProfiles Protein kinase domain profile. 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02116 Pumo-Chr9 52415930 52417180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02116 25 333 Receptor kinase-like Gene Family AT3G51740 39.032 1.49e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo9g02116 PK_Tyr_Ser-Thr 5.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02116 - - gmx:100809980 647.891