Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02112 ATGGAGAAGACAGGAATATTTTCAGCATTCGAGAAGCTTGAAAAGGTTGGAGAAGGAACATATGGGAAGGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAAATCGTTGCCCTAAAGAAGACTCGTCTTCACGAGGATCATGAAGGTGTTCCTCCTACCACTATTCGTGAGGTTTCGATTTTGCGAATGCTCTCTTGCGATCCCCATATCGTAAGGTTAATGGACGTAAAACAAGGTCACAACAAGCAAGGCTACACAGTGCTCTACTTGGTCTTTGAGTACATGGATACAGATCTCTTCAAATTCATTTGCTCTTTCCATCAAACTCCACAATCCATTCCACCCCAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCACGGTCATGGAGTCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTAAAAATAGCTGATCTTGGATTGGCTCGAGCATTTACTGTGCCAATTAAGCAATTTACACATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTAGGAGCTACCCATTACTCCACAGCAGTGGACATGTGGTCCGTTGGCTGCATATTTGCTGAACTTGTCACCAAACAACCACTCTTTCGTGGTGATTCCGAGCTGGGACAACTCCTTCGTATATTCAGGCTATTGGGTACTCCTAATGAAGAGGTGTGGCCAGGAGTGAGTAAACTAAGGAACTGGCATGAGTATCCCCAATGGAACCCTAAAAGTCTGTCAACAGCTGTTCCAACTTTGGATGACCTTGGACTGGATCTGCTATCTCAAATGTTGAAATATGAACCTTCAAAGAGGATTTCTGCAAAGAAAGCAATGGAACATCCTTACTTTGATGACCTCGACAAGAGCCACCTTTAA 927 0.4444 MEKTGIFSAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDHEGVPPTTIREVSILRMLSCDPHIVRLMDVKQGHNKQGYTVLYLVFEYMDTDLFKFICSFHQTPQSIPPQTVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKQFTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTKQPLFRGDSELGQLLRIFRLLGTPNEEVWPGVSKLRNWHEYPQWNPKSLSTAVPTLDDLGLDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKSHL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02112 308 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Pumo9g02112 308 SMART serkin_6 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02112 308 FunFam Cyclin-dependent kinase B2,2 6 96 - -
Pumo9g02112 308 FunFam Cyclin-dependent kinase 2 98 307 - -
Pumo9g02112 308 ProSiteProfiles Protein kinase domain profile. 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02112 308 Gene3D Transferase(Phosphotransferase) domain 1 104 307 - -
Pumo9g02112 308 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Pumo9g02112 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pumo9g02112 308 SUPERFAMILY Protein kinase-like (PK-like) 6 303 IPR011009 -
Pumo9g02112 308 Pfam Protein kinase domain 10 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02112 308 PANTHER CELL DIVISION PROTEIN KINASE 9 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02112 Pumo-Chr9 52345443 52347735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02112 7 308 Core Cell Cycle Gene Families AT1G20930 85.479 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pumo9g02112 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02112 K07760 - gmx:100808302 558.14